RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 PPP1R3DO95685 299 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 PRNPP04156 253 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 TBC1D3HP0C7X1 549 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 GTF2F2P13984 249 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 MPIP34949 423 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 ADH7P40394 386 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 GPR4P46093 362 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 DVL1P1P54792 670 aaPredicted RBP11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 ARF5P84085 180 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 FOXC1Q12948 553 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 BEX5Q5H9J7 111 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 PIP5KL1Q5T9C9 394 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 TBC1D3GQ6DHY5 549 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 EIF5AL1Q6IS14 154 aaKnown RBP11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 HIST2H3AQ71DI3 136 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 GALNT16Q8N428 558 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 OR10R2Q8NGX6 335 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 GFI1Q99684 422 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 SULT4A1Q9BR01 284 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 SOX7Q9BT81 388 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 MRPL37Q9BZE1 423 aaKnown RBP11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 CMC2Q9NRP2 79 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 KCNIP3Q9Y2W7 256 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 FAM96BQ9Y3D0 163 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 NINQ8N4C6 2090 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 CNOT1A5YKK6 2376 aaKnown RBP11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 SPTBN2O15020 2390 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 PRAMEF27A3QJZ7 478 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 SEC14L6B5MCN3 397 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 BNIP3LO60238 219 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 F10P00742 488 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 CATP04040 527 aaKnown RBP11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 MAOAP21397 527 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 VAMP1P23763 118 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 TAS2R38P59533 333 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 ACTBP60709 375 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 NUTF2P61970 127 aaKnown RBP11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 RAB1AP62820 205 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 ACTG1P63261 375 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 SIRPAP78324 504 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 MLC1Q15049 377 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 RHEBQ15382 184 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 TRIP6Q15654 476 aaKnown RBP11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 UNQ6126/PRO20091Q6UXV3 157 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 ZNF614Q8N883 585 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 OR4K17Q8NGC6 315 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 OR1J2Q8NGS2 313 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 BAHD1Q8TBE0 780 aaPredicted RBP11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 ARRDC3Q96B67 414 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 MICU1Q9BPX6 476 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 SLITRK2Q9H156 845 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 NOX4Q9NPH5 578 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 AHSPQ9NZD4 102 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 PISDQ9UG56 409 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 IL36AQ9UHA7 158 aa11.93□□□□□ -0.5
CNKSR3-204ENST00000479339 A0A1W2PPH5 198 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 ZC3H12DA2A288 527 aaKnown RBP11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 H0Y8X5 98 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 BHLHE40O14503 412 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 CD160O95971 181 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 RNH1P13489 461 aaKnown RBP11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 CD38P28907 300 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 SLC6A9P48067 706 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 CSNK1DP48730 415 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 CASP6P55212 293 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 SLC26A5P58743 744 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 SLBPQ14493 270 aaKnown RBP eCLIP11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 POM121L1PQ3SYA9 428 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 PRAMEF17Q5VTA0 474 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 LCTLQ6UWM7 567 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 NRMQ8IXM6 262 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 PNLDC1Q8NA58 520 aaKnown RBP11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 OR4K14Q8NGD5 310 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 UBE2E3Q969T4 207 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 KIRREL1Q96J84 757 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 HDAC8Q9BY41 377 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 UNKLQ9H9P5 680 aaKnown RBP11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 DYRK1BQ9Y463 629 aa11.92□□□□□ -0.5
CNKSR3-204ENST00000479339 ELOA3CA0A087WX78 387 aaPredicted RBP11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 TRBV6-7A0A0A0MS04 114 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 FAM221BA6H8Z2 402 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 UNC119BA6NIH7 251 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 FAM157AC9JC47 383 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 B4GALT2O60909 372 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 SOCS5O75159 536 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 TGFB1P01137 390 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 CRYABP02511 175 aaKnown RBP11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 ITGA5P08648 1049 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 BMP7P18075 431 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 SLC2A5P22732 501 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 ITPKBP27987 946 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 GSK3AP49840 483 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 ATP1B3P54709 279 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 PCBP4P57723 403 aaKnown RBP11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 KIAA0141Q14154 515 aaPredicted RBP11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 HNF4GQ14541 408 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 AWAT1Q58HT5 328 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 STEAP1BQ6NZ63 245 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 FIGNL1Q6PIW4 674 aa11.91□□□□□ -0.5
CNKSR3-204ENST00000479339 TGIF2LXQ8IUE1 241 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms