RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 NDUFAF3Q9BU61 184 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 SGPP1Q9BX95 441 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 LMAN2LQ9H0V9 348 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 OR5AC2Q9NZP5 309 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 TMED7Q9Y3B3 224 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 SPTBP11277 2137 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 TRBV6-7A0A0A0MS04 114 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 SLC5A10A0PJK1 596 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 OR5H15A6NDH6 313 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 OR5H1A6NKK0 313 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 C1orf105O95561 183 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 MPZP25189 248 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 TSPAN7P41732 249 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 SLC6A9P48067 706 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 BEX3Q00994 111 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 DUSP2Q05923 314 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 EIF2B1Q14232 305 aaKnown RBP19.25■□□□□ 0.67
SDF4-206ENST00000478938 EBPQ15125 230 aaKnown RBP19.25■□□□□ 0.67
SDF4-206ENST00000478938 DNLZQ5SXM8 178 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 OR2L5Q8NG80 312 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 TMEM239Q8WW34 195 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 IL17FQ96PD4 163 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 LYSMD1Q96S90 227 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 S100A13Q99584 98 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 TWSG1Q9GZX9 223 aa19.25■□□□□ 0.67
SDF4-206ENST00000478938 OPN3Q9H1Y3 402 aaPredicted RBP19.25■□□□□ 0.67
SDF4-206ENST00000478938 TMEM235A6NFC5 223 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 RAB4AP20338 218 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 PDX1P52945 283 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 TAS2R38P59533 333 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 RHEBQ15382 184 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 OR4C11Q6IEV9 310 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 C5orf24Q7Z6I8 188 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 SLC25A42Q86VD7 318 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 TMEM229BQ8NBD8 167 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 OR4S1Q8NGB4 309 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 JSRP1Q96MG2 331 aaPredicted RBP19.24■□□□□ 0.67
SDF4-206ENST00000478938 CWH43Q9H720 699 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 ZMAT3Q9HA38 289 aaKnown RBP19.24■□□□□ 0.67
SDF4-206ENST00000478938 UBQLN4Q9NRR5 601 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 MSRAQ9UJ68 235 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 PRG3Q9Y2Y8 225 aaPredicted RBP19.24■□□□□ 0.67
SDF4-206ENST00000478938 CENPVL1A0A0U1RR11 272 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 C17orf102A2RUQ5 167 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 RPL36A-HNRNPH2H7BZ11 118 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 TMEM127O75204 238 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 AK1P00568 194 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 MAS1LP35410 378 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 Q499Y3 187 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 LCN9Q8WX39 176 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 RNF166Q96A37 237 aaPredicted RBP19.24■□□□□ 0.67
SDF4-206ENST00000478938 NRTNQ99748 197 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 TAF9BQ9HBM6 251 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 USP36Q9P275 1121 aaKnown RBP19.24■□□□□ 0.67
SDF4-206ENST00000478938 ICAM5Q9UMF0 924 aa19.24■□□□□ 0.67
SDF4-206ENST00000478938 COL4A3Q01955 1670 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 A0A1B0GVT2 93 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 COCHO43405 550 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 C8orf89P0DMQ9 161 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 IL2RGP31785 369 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 TSFMP43897 325 aaKnown RBP19.23■□□□□ 0.67
SDF4-206ENST00000478938 CTXN3Q4LDR2 81 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 C14orf28Q4W4Y0 310 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 ZNF529Q6P280 563 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 BPIFA2Q96DR5 249 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 WNT5BQ9H1J7 359 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 RIMS4Q9H426 269 aaPredicted RBP19.23■□□□□ 0.67
SDF4-206ENST00000478938 PARP11Q9NR21 331 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 FLVCR1Q9Y5Y0 555 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 POMT1Q9Y6A1 747 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 MDC1Q14676 2089 aaKnown RBP19.23■□□□□ 0.67
SDF4-206ENST00000478938 A0A1B0GTH9 108 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 TBC1D3BA6NDS4 549 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 ZNF736B4DX44 427 aaPredicted RBP19.23■□□□□ 0.67
SDF4-206ENST00000478938 ADAP1O75689 374 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 TBC1D3HP0C7X1 549 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 MRPS6P82932 125 aaKnown RBP19.23■□□□□ 0.67
SDF4-206ENST00000478938 TBC1D3GQ6DHY5 549 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 TMEM150AQ86TG1 271 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 ADAD2Q8NCV1 583 aaKnown RBP19.23■□□□□ 0.67
SDF4-206ENST00000478938 DTD1Q8TEA8 209 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 ALG14Q96F25 216 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 LGR4Q9BXB1 951 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 B4GALT6Q9UBX8 382 aa19.23■□□□□ 0.67
SDF4-206ENST00000478938 GOLGA4Q13439 2230 aaKnown RBP19.22■□□□□ 0.67
SDF4-206ENST00000478938 A0A1W2PPC1 479 aa19.22■□□□□ 0.67
SDF4-206ENST00000478938 SRPX2O60687 465 aaPredicted RBP19.22■□□□□ 0.67
SDF4-206ENST00000478938 MYOGP15173 224 aa19.22■□□□□ 0.67
SDF4-206ENST00000478938 AKR1C4P17516 323 aa19.22■□□□□ 0.67
SDF4-206ENST00000478938 CD200P41217 278 aa19.22■□□□□ 0.67
SDF4-206ENST00000478938 SULT1A2P50226 295 aa19.22■□□□□ 0.67
SDF4-206ENST00000478938 ZNF627Q7L945 461 aa19.22■□□□□ 0.67
SDF4-206ENST00000478938 CCDC116Q8IYX3 515 aa19.22■□□□□ 0.67
SDF4-206ENST00000478938 OR10AC1Q8NH08 325 aa19.22■□□□□ 0.67
SDF4-206ENST00000478938 PLAGL1Q9UM63 463 aa19.22■□□□□ 0.67
SDF4-206ENST00000478938 ZNF443Q9Y2A4 671 aaPredicted RBP19.22■□□□□ 0.67
SDF4-206ENST00000478938 IL2RAP01589 272 aa19.22■□□□□ 0.67
SDF4-206ENST00000478938 ZNF136P52737 540 aa19.22■□□□□ 0.67
SDF4-206ENST00000478938 ZNF343Q6P1L6 599 aa19.22■□□□□ 0.67
SDF4-206ENST00000478938 ZNF563Q8TA94 476 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms