RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 INPP5JQ15735 1006 aaPredicted RBP9.71□□□□□ -0.85
VPS52-217ENST00000478934 C2orf76Q3KRA6 126 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 WDR45BQ5MNZ6 344 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 PXDC1Q5TGL8 231 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 OGFOD3Q6PK18 319 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 ARSKQ6UWY0 536 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 NDUFAF7Q7L592 441 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 GLRX5Q86SX6 157 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 OR1N1Q8NGS0 311 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 COQ8AQ8NI60 647 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 ZNF519Q8TB69 540 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 STK35Q8TDR2 534 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 PHYHIPQ92561 330 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 MCHR2Q969V1 340 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 OR8B4Q96RC9 309 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 ABHD6Q9BV23 337 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 FXYD6Q9H0Q3 95 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 UCK1Q9HA47 277 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 FGF21Q9NSA1 209 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 MED29Q9NX70 200 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 RDH8Q9NYR8 311 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 MED11Q9P086 117 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 NPTNQ9Y639 398 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 TRIOBPQ9H2D6 2365 aa9.71□□□□□ -0.85
VPS52-217ENST00000478934 IGLV1-36A0A0B4J1U3 117 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 A0A1W2PPL8 197 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 SLC22A23A1A5C7 686 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 L7N2F9 121 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 ACOT7O00154 380 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 EIF1AYO14602 144 aaKnown RBP9.71□□□□□ -0.86
VPS52-217ENST00000478934 GOSR2O14653 212 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 TPD52L2O43399 206 aaKnown RBP9.71□□□□□ -0.86
VPS52-217ENST00000478934 MBTPS2O43462 519 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 FADS1O60427 444 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 CTAG2O75638 210 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 CD3DP04234 171 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 CSN2P05814 226 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 CALCBP10092 127 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 SRFP11831 508 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 ZNF35P13682 527 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 GTF2F2P13984 249 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 RAG2P55895 527 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 EIF2B1Q14232 305 aaKnown RBP9.71□□□□□ -0.86
VPS52-217ENST00000478934 EMC4Q5J8M3 183 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 TMEM65Q6PI78 240 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 MAMDC2Q7Z304 686 aaPredicted RBP9.71□□□□□ -0.86
VPS52-217ENST00000478934 C8orf44Q96CB5 159 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 CYYR1Q96J86 154 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 EMC6Q9BV81 110 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 TTYH1Q9H313 450 aaPredicted RBP9.71□□□□□ -0.86
VPS52-217ENST00000478934 FSCN3Q9NQT6 498 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 TAS2R4Q9NYW5 299 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 STEAP1Q9UHE8 339 aa9.71□□□□□ -0.86
VPS52-217ENST00000478934 PHF3Q92576 2039 aaKnown RBP9.71□□□□□ -0.86
VPS52-217ENST00000478934 LOC100509620A0A075B734 347 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 DCDC2BA2VCK2 349 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 TMEM212A6NML5 194 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 LGALS8O00214 317 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 PLPP3O14495 311 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 SIGLEC5O15389 551 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 NPIPB7O75200 414 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 NDUFB6O95139 128 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 GLULP15104 373 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 PGCP20142 388 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 ARRB1P49407 418 aaPredicted RBP9.7□□□□□ -0.86
VPS52-217ENST00000478934 AP3S2P59780 193 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 EGR3Q06889 387 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 SIGLEC14Q08ET2 396 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 SLC29A4Q7RTT9 530 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 KRT77Q7Z794 578 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 TTC9Q92623 222 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 TMEM138Q9NPI0 162 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 COPS7AQ9UBW8 275 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 EPHA6Q9UF33 1036 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 MRTO4Q9UKD2 239 aaKnown RBP9.7□□□□□ -0.86
VPS52-217ENST00000478934 EMC9Q9Y3B6 208 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 MAB21L2Q9Y586 359 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 LOC105371267A0A1B0GV96 52 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 H3BML4 177 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 M0QYG6 137 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 RBBP9O75884 186 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 RAB40ALP0C0E4 278 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 GIMD1P0DJR0 217 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 MAPK3P27361 379 aaPredicted RBP9.7□□□□□ -0.86
VPS52-217ENST00000478934 EIF1AXP47813 144 aaKnown RBP9.7□□□□□ -0.86
VPS52-217ENST00000478934 SLC6A8P48029 635 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 RAB14P61106 215 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 SPOCK1Q08629 439 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 TDGQ13569 410 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 OR7A5Q15622 319 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 SGCBQ16585 318 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 ZNF626Q68DY1 528 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 C17orf107Q6ZR85 190 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 ZNF227Q86WZ6 799 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 MUC20Q8N307 709 aaPredicted RBP9.7□□□□□ -0.86
VPS52-217ENST00000478934 RAB40AQ8WXH6 277 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 DAZLQ92904 295 aaKnown RBP9.7□□□□□ -0.86
VPS52-217ENST00000478934 NKD1Q969G9 470 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 CMTM3Q96MX0 182 aa9.7□□□□□ -0.86
VPS52-217ENST00000478934 CCNL2Q96S94 520 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms