RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 WFIKKN1Q96NZ8 548 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 MAPKAP1Q9BPZ7 522 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 MED10Q9BTT4 135 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 YTHDF1Q9BYJ9 559 aaKnown RBP3.59□□□□□ -1.83
CCDC171-207ENST00000478913 DEFB127Q9H1M4 99 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 FBXO44Q9H4M3 255 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 ZNHIT6Q9NWK9 470 aaKnown RBP3.59□□□□□ -1.83
CCDC171-207ENST00000478913 P2RX2Q9UBL9 471 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 DHCR7Q9UBM7 475 aaKnown RBP3.59□□□□□ -1.83
CCDC171-207ENST00000478913 HEATR5AQ86XA9 2040 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 ARHGEF35A5YM69 484 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 FRG2CA6NGY1 282 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 GOLGA6L10A6NI86 522 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 GOLGA8KD6RF30 607 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 PFKFB2O60825 505 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 TDP2O95551 362 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 IGHV1-2P23083 117 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 PTBP1P26599 531 aaKnown RBP eCLIP3.58□□□□□ -1.84
CCDC171-207ENST00000478913 PPP1CAP62136 330 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 FUT7Q11130 342 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 KIAA0040Q15053 153 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 UBE2V2Q15819 145 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 GLYR1Q49A26 553 aaPredicted RBP3.58□□□□□ -1.84
CCDC171-207ENST00000478913 CYBRD1Q53TN4 286 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 C1orf185Q5T7R7 199 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 SHISA6Q6ZSJ9 500 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 KIAA1328Q86T90 577 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 EGFL6Q8IUX8 553 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 ZNF619Q8N2I2 560 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 GPR137CQ8N3F9 429 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 ZNF557Q8N988 423 aaPredicted RBP3.58□□□□□ -1.84
CCDC171-207ENST00000478913 MINDY2Q8NBR6 621 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 FAM71CQ8NEG0 241 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 OR11G2Q8NGC1 345 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 C22orf15Q8WYQ4 148 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 FAF2Q96CS3 445 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 VSIG2Q96IQ7 327 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 C8orf76Q96K31 380 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 NAPGQ99747 312 aaPredicted RBP3.58□□□□□ -1.84
CCDC171-207ENST00000478913 TM2D1Q9BX74 207 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 PARD6BQ9BYG5 372 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 KRT23Q9C075 422 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 RAB17Q9H0T7 212 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 KAT8Q9H7Z6 458 aaKnown RBP3.58□□□□□ -1.84
CCDC171-207ENST00000478913 ROPN1Q9HAT0 212 aaPredicted RBP3.58□□□□□ -1.84
CCDC171-207ENST00000478913 MEPEQ9NQ76 525 aaPredicted RBP3.58□□□□□ -1.84
CCDC171-207ENST00000478913 ZNF226Q9NYT6 803 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 FAT2Q9NYQ8 4349 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 NUP210LQ5VU65 1888 aa3.58□□□□□ -1.84
CCDC171-207ENST00000478913 C5orf63A6NC05 138 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 KRT87PA6NCN2 255 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 K7ERQ8 282 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 PPIHO43447 177 aaKnown RBP3.57□□□□□ -1.84
CCDC171-207ENST00000478913 TOM1L1O75674 476 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 JCHAINP01591 159 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 ANXA4P09525 319 aaPredicted RBP3.57□□□□□ -1.84
CCDC171-207ENST00000478913 GAP43P17677 238 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 IL10P22301 178 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 CMA1P23946 247 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 PRTN3P24158 256 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 ZBTB25P24278 435 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 LOXP28300 417 aaPredicted RBP3.57□□□□□ -1.84
CCDC171-207ENST00000478913 SSR1P43307 286 aaKnown RBP3.57□□□□□ -1.84
CCDC171-207ENST00000478913 SYKP43405 635 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 EMDP50402 254 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 LYZP61626 148 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 IMMTQ16891 758 aaKnown RBP3.57□□□□□ -1.84
CCDC171-207ENST00000478913 TOR1AIP1Q5JTV8 583 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 ZNF658Q5TYW1 1059 aaPredicted RBP3.57□□□□□ -1.84
CCDC171-207ENST00000478913 BTNL3Q6UXE8 466 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 RAI1Q7Z5J4 1906 aaPredicted RBP3.57□□□□□ -1.84
CCDC171-207ENST00000478913 SCD5Q86SK9 330 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 LUZP2Q86TE4 346 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 VSTM4Q8IW00 320 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 CADM2Q8N3J6 435 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 BPIFB2Q8N4F0 458 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 C10orf105Q8TEF2 133 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 CAPZA3Q96KX2 299 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 FAM111AQ96PZ2 611 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 PANX2Q96RD6 677 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 C1orf123Q9NWV4 160 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 SOHLH2Q9NX45 425 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 NINJ2Q9NZG7 142 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 MOKQ9UQ07 419 aa3.57□□□□□ -1.84
CCDC171-207ENST00000478913 ERICH2A1L162 156 aa3.56□□□□□ -1.84
CCDC171-207ENST00000478913 A8MUI8 341 aa3.56□□□□□ -1.84
CCDC171-207ENST00000478913 FAM220BPB1ANY3 271 aa3.56□□□□□ -1.84
CCDC171-207ENST00000478913 TM9SF1O15321 606 aa3.56□□□□□ -1.84
CCDC171-207ENST00000478913 RAMP1O60894 148 aa3.56□□□□□ -1.84
CCDC171-207ENST00000478913 GSTT2P0CG29 244 aa3.56□□□□□ -1.84
CCDC171-207ENST00000478913 GSTT2BP0CG30 244 aa3.56□□□□□ -1.84
CCDC171-207ENST00000478913 RRASP10301 218 aa3.56□□□□□ -1.84
CCDC171-207ENST00000478913 GCFC2P16383 781 aaKnown RBP3.56□□□□□ -1.84
CCDC171-207ENST00000478913 CRYGSP22914 178 aa3.56□□□□□ -1.84
CCDC171-207ENST00000478913 ASMTP46597 345 aa3.56□□□□□ -1.84
CCDC171-207ENST00000478913 RGRP47804 291 aa3.56□□□□□ -1.84
CCDC171-207ENST00000478913 P2RY4P51582 365 aa3.56□□□□□ -1.84
CCDC171-207ENST00000478913 MAP3K7CLP57077 242 aa3.56□□□□□ -1.84
CCDC171-207ENST00000478913 NDPQ00604 133 aa3.56□□□□□ -1.84
CCDC171-207ENST00000478913 PLOD1Q02809 727 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms