RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 IGHV1-18A0A0C4DH31 117 aa23.3■■□□□ 1.32
CCM2-211ENST00000478582 A0A1W2PPL8 197 aa23.3■■□□□ 1.32
CCM2-211ENST00000478582 DCTN6O00399 190 aa23.3■■□□□ 1.32
CCM2-211ENST00000478582 IFNGP01579 166 aa23.3■■□□□ 1.32
CCM2-211ENST00000478582 CD79AP11912 226 aa23.3■■□□□ 1.32
CCM2-211ENST00000478582 RAB1AP62820 205 aa23.3■■□□□ 1.32
CCM2-211ENST00000478582 SLC36A2Q495M3 483 aa23.3■■□□□ 1.32
CCM2-211ENST00000478582 GLB1L2Q8IW92 636 aa23.3■■□□□ 1.32
CCM2-211ENST00000478582 IQCF1Q8N6M8 205 aa23.3■■□□□ 1.32
CCM2-211ENST00000478582 RADILQ96JH8 1075 aa23.3■■□□□ 1.32
CCM2-211ENST00000478582 TSSK2Q96PF2 358 aa23.3■■□□□ 1.32
CCM2-211ENST00000478582 WACQ9BTA9 647 aa23.3■■□□□ 1.32
CCM2-211ENST00000478582 NOX3Q9HBY0 568 aa23.3■■□□□ 1.32
CCM2-211ENST00000478582 SRA1Q9HD15 236 aaKnown RBP23.3■■□□□ 1.32
CCM2-211ENST00000478582 RPRD1BQ9NQG5 326 aaKnown RBP23.3■■□□□ 1.32
CCM2-211ENST00000478582 FBXL3Q9UKT7 428 aa23.3■■□□□ 1.32
CCM2-211ENST00000478582 COA3Q9Y2R0 106 aaPredicted RBP23.3■■□□□ 1.32
CCM2-211ENST00000478582 F8P00451 2351 aa23.3■■□□□ 1.32
CCM2-211ENST00000478582 MITFO75030 526 aaPredicted RBP23.29■■□□□ 1.32
CCM2-211ENST00000478582 ATE1O95260 518 aa23.29■■□□□ 1.32
CCM2-211ENST00000478582 HMGN1P05114 100 aa23.29■■□□□ 1.32
CCM2-211ENST00000478582 CST2P09228 141 aa23.29■■□□□ 1.32
CCM2-211ENST00000478582 MSR1P21757 451 aa23.29■■□□□ 1.32
CCM2-211ENST00000478582 PIGFQ07326 219 aa23.29■■□□□ 1.32
CCM2-211ENST00000478582 KEAP1Q14145 624 aa23.29■■□□□ 1.32
CCM2-211ENST00000478582 ADAM5Q6NVV9 412 aa23.29■■□□□ 1.32
CCM2-211ENST00000478582 ZNF704Q6ZNC4 412 aaPredicted RBP23.29■■□□□ 1.32
CCM2-211ENST00000478582 KCNN2Q9H2S1 579 aa23.29■■□□□ 1.32
CCM2-211ENST00000478582 RIIAD1A6NNX1 92 aa23.28■■□□□ 1.32
CCM2-211ENST00000478582 PLAUP00749 431 aa23.28■■□□□ 1.32
CCM2-211ENST00000478582 SCG5P05408 212 aa23.28■■□□□ 1.32
CCM2-211ENST00000478582 MMP7P09237 267 aaPredicted RBP23.28■■□□□ 1.32
CCM2-211ENST00000478582 PATE4P0C8F1 98 aa23.28■■□□□ 1.32
CCM2-211ENST00000478582 IGFBP5P24593 272 aa23.28■■□□□ 1.32
CCM2-211ENST00000478582 CRMP1Q14194 572 aa23.28■■□□□ 1.32
CCM2-211ENST00000478582 KCNMB1Q16558 191 aa23.28■■□□□ 1.32
CCM2-211ENST00000478582 TMEM53Q6P2H8 277 aa23.28■■□□□ 1.32
CCM2-211ENST00000478582 LRRC18Q8N456 261 aa23.28■■□□□ 1.32
CCM2-211ENST00000478582 CYB561A3Q8NBI2 242 aa23.28■■□□□ 1.32
CCM2-211ENST00000478582 CIB1Q99828 191 aa23.28■■□□□ 1.32
CCM2-211ENST00000478582 TEX12Q9BXU0 123 aa23.28■■□□□ 1.32
CCM2-211ENST00000478582 NMNAT2Q9BZQ4 307 aa23.28■■□□□ 1.32
CCM2-211ENST00000478582 RERGLQ9H628 205 aa23.28■■□□□ 1.32
CCM2-211ENST00000478582 USE1Q9NZ43 259 aa23.28■■□□□ 1.32
CCM2-211ENST00000478582 PRRC2AP48634 2157 aaKnown RBP23.27■■□□□ 1.32
CCM2-211ENST00000478582 ABCD4O14678 606 aa23.27■■□□□ 1.32
CCM2-211ENST00000478582 RAB36O95755 333 aa23.27■■□□□ 1.32
CCM2-211ENST00000478582 CECR9P0C854 216 aa23.27■■□□□ 1.32
CCM2-211ENST00000478582 ZNF14P17017 642 aaPredicted RBP23.27■■□□□ 1.32
CCM2-211ENST00000478582 ZNF3P17036 446 aa23.27■■□□□ 1.32
CCM2-211ENST00000478582 PTDSS1P48651 473 aaKnown RBP23.27■■□□□ 1.32
CCM2-211ENST00000478582 SLC25A1P53007 311 aa23.27■■□□□ 1.32
CCM2-211ENST00000478582 ENDOGQ14249 297 aaKnown RBP23.27■■□□□ 1.32
CCM2-211ENST00000478582 PTGES3Q15185 160 aaKnown RBP23.27■■□□□ 1.32
CCM2-211ENST00000478582 SYT9Q86SS6 491 aa23.27■■□□□ 1.32
CCM2-211ENST00000478582 IL17RDQ8NFM7 739 aa23.27■■□□□ 1.32
CCM2-211ENST00000478582 OR2T4Q8NH00 348 aa23.27■■□□□ 1.32
CCM2-211ENST00000478582 C9orf16Q9BUW7 83 aa23.27■■□□□ 1.32
CCM2-211ENST00000478582 SHISA9B4DS77 424 aa23.26■■□□□ 1.31
CCM2-211ENST00000478582 BAG2O95816 211 aa23.26■■□□□ 1.31
CCM2-211ENST00000478582 ALPLP05186 524 aa23.26■■□□□ 1.31
CCM2-211ENST00000478582 IDH3GP51553 393 aaPredicted RBP23.26■■□□□ 1.31
CCM2-211ENST00000478582 LSM6P62312 80 aaKnown RBP23.26■■□□□ 1.31
CCM2-211ENST00000478582 DAG1Q14118 895 aa23.26■■□□□ 1.31
CCM2-211ENST00000478582 LILRB1Q8NHL6 650 aaPredicted RBP23.26■■□□□ 1.31
CCM2-211ENST00000478582 FBXO17Q96EF6 278 aa23.26■■□□□ 1.31
CCM2-211ENST00000478582 ZNF416Q9BWM5 594 aa23.26■■□□□ 1.31
CCM2-211ENST00000478582 FN3KQ9H479 309 aa23.26■■□□□ 1.31
CCM2-211ENST00000478582 RNF121Q9H920 327 aa23.26■■□□□ 1.31
CCM2-211ENST00000478582 CELSR1Q9NYQ6 3014 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 C12orf71A8MTZ7 269 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 SURF4O15260 269 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 SERPINA5P05154 406 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 CELA3BP08861 270 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 GAAP10253 952 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 CD53P19397 219 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 PCBD1P61457 104 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 NAAAQ02083 359 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 GLO1Q04760 184 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 DEFB113Q30KQ7 82 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 TMEM236Q5W0B7 351 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 MYPOPQ86VE0 399 aaPredicted RBP23.25■■□□□ 1.31
CCM2-211ENST00000478582 FOXN4Q96NZ1 517 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 GABARAPL3Q9BY60 117 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 CCNB1IP1Q9NPC3 277 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 HIVEP1P15822 2718 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 MED13LQ71F56 2210 aa23.25■■□□□ 1.31
CCM2-211ENST00000478582 ZAR1LA6NP61 321 aa23.24■■□□□ 1.31
CCM2-211ENST00000478582 EI24O14681 340 aa23.24■■□□□ 1.31
CCM2-211ENST00000478582 ZNF32P17041 273 aa23.24■■□□□ 1.31
CCM2-211ENST00000478582 ALDH3A2P51648 485 aa23.24■■□□□ 1.31
CCM2-211ENST00000478582 ELF3P78545 371 aaPredicted RBP23.24■■□□□ 1.31
CCM2-211ENST00000478582 HSF2Q03933 536 aa23.24■■□□□ 1.31
CCM2-211ENST00000478582 SPOCK1Q08629 439 aa23.24■■□□□ 1.31
CCM2-211ENST00000478582 NPRL3Q12980 569 aa23.24■■□□□ 1.31
CCM2-211ENST00000478582 UGT2A3Q6UWM9 527 aa23.24■■□□□ 1.31
CCM2-211ENST00000478582 ZNF584Q8IVC4 421 aa23.24■■□□□ 1.31
CCM2-211ENST00000478582 DEPDC4Q8N2C3 294 aa23.24■■□□□ 1.31
CCM2-211ENST00000478582 PIAS4Q8N2W9 510 aaPredicted RBP23.24■■□□□ 1.31
CCM2-211ENST00000478582 CBR4Q8N4T8 237 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms