RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 MBNL2Q5VZF2 373 aaKnown RBP14.17□□□□□ -0.14
TRIM13-208ENST00000478111 HDDC2Q7Z4H3 204 aa14.17□□□□□ -0.14
TRIM13-208ENST00000478111 KLF14Q8TD94 323 aaPredicted RBP14.17□□□□□ -0.14
TRIM13-208ENST00000478111 NSMAFQ92636 917 aa14.17□□□□□ -0.14
TRIM13-208ENST00000478111 RAB39BQ96DA2 213 aa14.17□□□□□ -0.14
TRIM13-208ENST00000478111 ZNF583Q96ND8 569 aa14.17□□□□□ -0.14
TRIM13-208ENST00000478111 OR2J1Q9GZK6 312 aa14.17□□□□□ -0.14
TRIM13-208ENST00000478111 TXNIPQ9H3M7 391 aa14.17□□□□□ -0.14
TRIM13-208ENST00000478111 NPHS2Q9NP85 383 aa14.17□□□□□ -0.14
TRIM13-208ENST00000478111 CCNB1IP1Q9NPC3 277 aa14.17□□□□□ -0.14
TRIM13-208ENST00000478111 OPN4Q9UHM6 478 aa14.17□□□□□ -0.14
TRIM13-208ENST00000478111 BAG5Q9UL15 447 aa14.17□□□□□ -0.14
TRIM13-208ENST00000478111 A0A0G2JMP0 313 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 A0A0X1KG70 313 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 C5orf49A4QMS7 147 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 ZSCAN5BA6NJL1 495 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 J3QLI3 93 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 TPD52L2O43399 206 aaKnown RBP14.16□□□□□ -0.14
TRIM13-208ENST00000478111 SPRY3O43610 288 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 PIP5K1CO60331 668 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 ICMTO60725 284 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 EDF1O60869 148 aaKnown RBP14.16□□□□□ -0.14
TRIM13-208ENST00000478111 NGFP01138 241 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 FSHBP01225 129 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 MT-ND5P03915 603 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 ADH4P08319 380 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 ERVK-25P63136 954 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 HNRNPA0Q13151 305 aaKnown RBP14.16□□□□□ -0.14
TRIM13-208ENST00000478111 CYLC2Q14093 348 aaPredicted RBP14.16□□□□□ -0.14
TRIM13-208ENST00000478111 SGCAQ16586 387 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 METTL21CQ5VZV1 264 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 FOXL2NBQ6ZUU3 175 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 RFPL4BQ6ZWI9 263 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 TEX29Q8N6K0 151 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 CLDN22Q8N7P3 220 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 OR4M2Q8NGB6 313 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 CCL17Q92583 94 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 RAB1CQ92928 201 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 LRRC58Q96CX6 371 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 ELMOD3Q96FG2 381 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 OR2H1Q9GZK4 316 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 WNT5BQ9H1J7 359 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 KCNN2Q9H2S1 579 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 ESM1Q9NQ30 184 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 STX18Q9P2W9 335 aaKnown RBP14.16□□□□□ -0.14
TRIM13-208ENST00000478111 HIF3AQ9Y2N7 669 aa14.16□□□□□ -0.14
TRIM13-208ENST00000478111 A0A0G2JND7 137 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 TRIM77I1YAP6 450 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 THRBP10828 461 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 EGR1P18146 543 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 LAP3P28838 519 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 GCH1P30793 250 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 GDI2P50395 445 aaKnown RBP14.15□□□□□ -0.14
TRIM13-208ENST00000478111 ACTG1P63261 375 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 CD47Q08722 323 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 FHL1Q13642 323 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 DCAF12L2Q5VW00 463 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 LRRC75AQ8NAA5 344 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 OR8J3Q8NGG0 315 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 GCDHQ92947 438 aaPredicted RBP14.15□□□□□ -0.14
TRIM13-208ENST00000478111 TIMD4Q96H15 378 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 ALG12Q9BV10 488 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 EIF3KQ9UBQ5 218 aaKnown RBP14.15□□□□□ -0.14
TRIM13-208ENST00000478111 A4GNTQ9UNA3 340 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 MED31Q9Y3C7 131 aa14.15□□□□□ -0.14
TRIM13-208ENST00000478111 IGHMP01871 453 aa14.14□□□□□ -0.15
TRIM13-208ENST00000478111 VIMP08670 466 aaKnown RBP14.14□□□□□ -0.15
TRIM13-208ENST00000478111 CST2P09228 141 aa14.14□□□□□ -0.15
TRIM13-208ENST00000478111 RPL27P61353 136 aaKnown RBP14.14□□□□□ -0.15
TRIM13-208ENST00000478111 TAF11Q15544 211 aa14.14□□□□□ -0.15
TRIM13-208ENST00000478111 TUSC1Q2TAM9 212 aa14.14□□□□□ -0.15
TRIM13-208ENST00000478111 CYBRD1Q53TN4 286 aa14.14□□□□□ -0.15
TRIM13-208ENST00000478111 ALG10Q5BKT4 473 aa14.14□□□□□ -0.15
TRIM13-208ENST00000478111 ZDHHC22Q8N966 263 aa14.14□□□□□ -0.15
TRIM13-208ENST00000478111 C10orf82Q8WW14 230 aa14.14□□□□□ -0.15
TRIM13-208ENST00000478111 SLC6A7Q99884 636 aa14.14□□□□□ -0.15
TRIM13-208ENST00000478111 SH3GL1Q99961 368 aa14.14□□□□□ -0.15
TRIM13-208ENST00000478111 ECSITQ9BQ95 431 aa14.14□□□□□ -0.15
TRIM13-208ENST00000478111 SIKE1Q9BRV8 207 aa14.14□□□□□ -0.15
TRIM13-208ENST00000478111 RBM4Q9BWF3 364 aaKnown RBP14.14□□□□□ -0.15
TRIM13-208ENST00000478111 DCAF16Q9NXF7 216 aa14.14□□□□□ -0.15
TRIM13-208ENST00000478111 PLSCR5A0PG75 271 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 SPRY1O43609 319 aaPredicted RBP14.13□□□□□ -0.15
TRIM13-208ENST00000478111 SCG5P05408 212 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 CD55P08174 381 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 ZFP36P26651 326 aaKnown RBP14.13□□□□□ -0.15
TRIM13-208ENST00000478111 RBMXP38159 391 aaKnown RBP14.13□□□□□ -0.15
TRIM13-208ENST00000478111 PPP1CBP62140 327 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 TOP3AQ13472 1001 aaPredicted RBP14.13□□□□□ -0.15
TRIM13-208ENST00000478111 ENDOGQ14249 297 aaKnown RBP14.13□□□□□ -0.15
TRIM13-208ENST00000478111 COQ5Q5HYK3 327 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 ZNF774Q6NX45 483 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 C1orf174Q8IYL3 243 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 C3orf56Q8N813 242 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 ABHD4Q8TB40 342 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 NANPQ8TBE9 248 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 GEMIN6Q8WXD5 167 aaKnown RBP14.13□□□□□ -0.15
TRIM13-208ENST00000478111 DVL3Q92997 716 aaPredicted RBP14.13□□□□□ -0.15
TRIM13-208ENST00000478111 BPIFA2Q96DR5 249 aa14.13□□□□□ -0.15
TRIM13-208ENST00000478111 RBP7Q96R05 134 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms