RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 IL6RP08887 468 aaPredicted RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 PATE4P0C8F1 98 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 SAGP10523 405 aaPredicted RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 PNMTP11086 282 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF35P13682 527 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 HLA-DOBP13765 273 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF14P17017 642 aaPredicted RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 UQCRC2P22695 453 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 FKBP2P26885 142 aaKnown RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 IL12AP29459 219 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 MAGEB1P43366 347 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 GPR6P46095 362 aaPredicted RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 MVDP53602 400 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 AQP5P55064 265 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 CLDN17P56750 224 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 UBE2NP61088 152 aaKnown RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 UBA52P62987 128 aaKnown RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 HOXC5Q00444 222 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 POU3F1Q03052 451 aaPredicted RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 CKAP4Q07065 602 aaKnown RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 NPRL3Q12980 569 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 RAB32Q13637 225 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 WHAMMP3Q1A5X7 153 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 SPRNQ5BIV9 151 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 SPANXN4Q5MJ08 99 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 NIPAL3Q6P499 406 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF836Q6ZNA1 936 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 COMTD1Q86VU5 262 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 RNF130Q86XS8 419 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 ZNF584Q8IVC4 421 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 TMEM123Q8N131 208 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 RIBC1Q8N443 379 aaPredicted RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 PAQR4Q8N4S7 273 aaPredicted RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 CCDC63Q8NA47 563 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 FNDC5Q8NAU1 212 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 OR8J2Q8NGG1 315 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 OR4A15Q8NGL6 344 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 C22orf15Q8WYQ4 148 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 MRPL24Q96A35 216 aaKnown RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 LRRC58Q96CX6 371 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 DDIT4LQ96D03 193 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 KTI12Q96EK9 354 aaPredicted RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 PPP1R36Q96LQ0 422 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 PPP3R2Q96LZ3 170 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 DUX5Q96PT3 197 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 NAA11Q9BSU3 229 aaPredicted RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 DPCDQ9BVM2 203 aaPredicted RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 LINC00470Q9BZP3 86 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 C20orf27Q9GZN8 174 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 TSPYL1Q9H0U9 437 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 POLE3Q9NRF9 147 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 ATAD3AQ9NVI7 634 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 ASIC5Q9NY37 505 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 USP22Q9UPT9 525 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 SOX21Q9Y651 276 aaPredicted RBP3.88□□□□□ -1.79
CKS1B-207ENST00000477676 CACNG2Q9Y698 323 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 DSPPQ9NZW4 1301 aa3.88□□□□□ -1.79
CKS1B-207ENST00000477676 HUWE1Q7Z6Z7 4374 aaKnown RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 IGKV1D-42A0A075B6H8 117 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 PRSS51A0A1B0GVH4 220 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 SMIM23A6NLE4 172 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 A8MVM7 634 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 MS4A18H0YCH9 400 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 TRIM77I1YAP6 450 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 M0QYG6 137 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 M0R233 179 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 PPIHO43447 177 aaKnown RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 SPAG7O75391 227 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 PNPP00491 289 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 IGHV2-5P01817 119 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 TFP02787 698 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 ANXA2P07355 339 aaKnown RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 ALDOCP09972 364 aaKnown RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 TFPTP0C1Z6 253 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 KITP10721 976 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 ACHEP22303 614 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 CXCR1P25024 350 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 PPIFP30405 207 aaKnown RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 GLRXP35754 106 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 RPL3P39023 403 aaKnown RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 EVX1P49640 407 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 EMX2Q04743 252 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 PMS2P11Q13670 270 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 CHI3L2Q15782 390 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 CEACAM16Q2WEN9 425 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 MS4A18Q3C1V0 323 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 ALKBH6Q3KRA9 238 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 SLC9B1Q4ZJI4 515 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 GPAT3Q53EU6 434 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 KLF17Q5JT82 389 aaPredicted RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 AVPI1Q5T686 147 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 C1orf140Q5VVS0 124 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 PRAMEF8Q5VWM4 474 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 PRAMEF7Q5VXH5 474 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 TMEM225Q6GV28 225 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 FAHD2BQ6P2I3 314 aaPredicted RBP3.87□□□□□ -1.79
CKS1B-207ENST00000477676 LRRC74BQ6ZQY2 392 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 SERPINA11Q86U17 422 aa3.87□□□□□ -1.79
CKS1B-207ENST00000477676 NATD1Q8N6N6 113 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms