RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 THBS2P35442 1172 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 MNX1P50219 401 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-220ENST00000477528 PRTGQ2VWP7 1150 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 MFSD8Q8NHS3 518 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 ORAI1Q96D31 301 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 RAB3CQ96E17 227 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 HRASLSQ9HDD0 168 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 LSM2Q9Y333 95 aaKnown RBP13.28□□□□□ -0.28
HDAC6-220ENST00000477528 CD79BP40259 229 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 ZNF117Q03924 483 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 FUT5Q11128 374 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 GNMTQ14749 295 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 DCAF12Q5T6F0 453 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 TCTE3Q8IZS6 198 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 CARFQ8N187 725 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 DCUN1D4Q92564 292 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 VRK1Q99986 396 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-220ENST00000477528 SCPEP1Q9HB40 452 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 B3GALT5Q9Y2C3 310 aa13.28□□□□□ -0.28
HDAC6-220ENST00000477528 FAM230AA0A1W2PPH8 454 aa13.27□□□□□ -0.28
HDAC6-220ENST00000477528 ZNF136P52737 540 aa13.27□□□□□ -0.28
HDAC6-220ENST00000477528 SUMO3P55854 103 aaPredicted RBP13.27□□□□□ -0.28
HDAC6-220ENST00000477528 SORDQ00796 357 aa13.27□□□□□ -0.28
HDAC6-220ENST00000477528 IFITM3Q01628 133 aa13.27□□□□□ -0.28
HDAC6-220ENST00000477528 C17orf47Q8NEP4 570 aa13.27□□□□□ -0.28
HDAC6-220ENST00000477528 OR5H6Q8NGV6 325 aa13.27□□□□□ -0.28
HDAC6-220ENST00000477528 OR4K15Q8NH41 348 aa13.27□□□□□ -0.28
HDAC6-220ENST00000477528 DVL3Q92997 716 aaPredicted RBP13.27□□□□□ -0.28
HDAC6-220ENST00000477528 JAM3Q9BX67 310 aa13.27□□□□□ -0.28
HDAC6-220ENST00000477528 SELENOIQ9C0D9 397 aa13.27□□□□□ -0.28
HDAC6-220ENST00000477528 EXOSC3Q9NQT5 275 aaKnown RBP13.27□□□□□ -0.28
HDAC6-220ENST00000477528 MLXQ9UH92 298 aa13.27□□□□□ -0.28
HDAC6-220ENST00000477528 LPLP06858 475 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 SERPINA2P20848 420 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 ZNF546Q86UE3 836 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 SGPP2Q8IWX5 399 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 LRRC18Q8N456 261 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 OR52N5Q8NH56 324 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 TAAR8Q969N4 342 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 FAM86C1Q9NVL1 165 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 APOC3P02656 99 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 ADH6P28332 368 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 PIGQQ9BRB3 760 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 KLF15Q9UIH9 416 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 ING1Q9UK53 422 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-220ENST00000477528 CHD5Q8TDI0 1954 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 IGHV1OR21-1A0A087WYE8 117 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 E9PI62 339 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 PMS2P2O95744 297 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 GABRR1P24046 479 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 ABCD3P28288 659 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 GRB2P62993 217 aaKnown RBP13.27□□□□□ -0.29
HDAC6-220ENST00000477528 PMPCAQ10713 525 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 CDONQ4KMG0 1287 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 GTPBP8Q8N3Z3 284 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-220ENST00000477528 OR1L3Q8NH93 324 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 TTC9Q92623 222 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 SLAMF6Q96DU3 332 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 AUNIPQ9H7T9 357 aa13.27□□□□□ -0.29
HDAC6-220ENST00000477528 ZAR1Q86SH2 424 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 TMEM52Q8NDY8 209 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 OR51S1Q8NGJ8 323 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 OTOSQ8NHW6 89 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 SNIP1Q8TAD8 396 aaKnown RBP13.26□□□□□ -0.29
HDAC6-220ENST00000477528 PTP4A1Q93096 173 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 MRGPRX4Q96LA9 322 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 C12orf10Q9HB07 376 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 MCTS1Q9ULC4 181 aaKnown RBP13.26□□□□□ -0.29
HDAC6-220ENST00000477528 BOKQ9UMX3 212 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-220ENST00000477528 SLC22A13Q9Y226 551 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 R4GMQ9 66 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 SSX4O60224 188 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 ANXA7P20073 488 aaKnown RBP13.26□□□□□ -0.29
HDAC6-220ENST00000477528 CRYBA2P53672 197 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 TAS2R46P59540 309 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 ZNF85Q03923 595 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 THEM4Q5T1C6 240 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 OR6F1Q8NGZ6 308 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 SIGLEC11Q96RL6 698 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 ZMAT3Q9HA38 289 aaKnown RBP13.26□□□□□ -0.29
HDAC6-220ENST00000477528 PISDQ9UG56 409 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 G3V3Y1 287 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 M0QYG6 137 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 ZNF35P13682 527 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 PPP3CBP16298 524 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 GNRHRP30968 328 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 MAP2K6P52564 334 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 CEBPGP53567 150 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 GPR85P60893 370 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 CD300CQ08708 224 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 TRIM61Q5EBN2 209 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 DMKNQ6E0U4 476 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-220ENST00000477528 OR8B4Q96RC9 309 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 WFDC6Q9BQY6 131 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 VN1R1Q9GZP7 353 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 MIXL1Q9H2W2 232 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 ZFP57Q9NU63 452 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 CTSFQ9UBX1 484 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 NUP50Q9UKX7 468 aa13.26□□□□□ -0.29
HDAC6-220ENST00000477528 CACNA1CQ13936 2221 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms