RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 A0A1B0GTH9 108 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 A0A1W2PPL8 197 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 METTL15A6NJ78 407 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 EGR3Q06889 387 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 TBR1Q16650 682 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 TIMM50Q3ZCQ8 353 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 C22orf42Q6IC83 251 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 GDPGP1Q6ZNW5 385 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 LINGO2Q7L985 606 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.79□□□□□ -0.36
COL4A6-206ENST00000477085 RPS4Y2Q8TD47 263 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 ST7LQ8TDW4 575 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 GHSRQ92847 366 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 ABHD17AQ96GS6 310 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 PPIL3Q9H2H8 161 aaKnown RBP12.79□□□□□ -0.36
COL4A6-206ENST00000477085 EXO5Q9H790 373 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 EMC7Q9NPA0 242 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 EXOSC4Q9NPD3 245 aaKnown RBP12.79□□□□□ -0.36
COL4A6-206ENST00000477085 CYB5R1Q9UHQ9 305 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 SSR3Q9UNL2 185 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 TMEM14AQ9Y6G1 99 aa12.79□□□□□ -0.36
COL4A6-206ENST00000477085 A0A1B0GVC2 190 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 TRDV1A0A1B0GX56 115 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 SULT1C4O75897 302 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 RPP14O95059 124 aaKnown RBP12.78□□□□□ -0.36
COL4A6-206ENST00000477085 GBX2P52951 348 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-206ENST00000477085 ROR2Q01974 943 aaKnown RBP12.78□□□□□ -0.36
COL4A6-206ENST00000477085 ROM1Q03395 351 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 EIF2B1Q14232 305 aaKnown RBP12.78□□□□□ -0.36
COL4A6-206ENST00000477085 CDK5R1Q15078 307 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 PLEKHN1Q494U1 663 aaPredicted RBP12.78□□□□□ -0.36
COL4A6-206ENST00000477085 C10orf128Q5T292 105 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 SLC18B1Q6NT16 456 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 LRRN1Q6UXK5 716 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 SPATC1Q76KD6 591 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 DCXRQ7Z4W1 244 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 OR13C5Q8NGS8 318 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 OR6N1Q8NGY5 312 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 EXTL1Q92935 676 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 MAP6Q96JE9 813 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 OR8B4Q96RC9 309 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 SLIRPQ9GZT3 109 aaKnown RBP12.78□□□□□ -0.36
COL4A6-206ENST00000477085 SEC61A2Q9H9S3 476 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 SLC24A3Q9HC58 644 aa12.78□□□□□ -0.36
COL4A6-206ENST00000477085 SHISA3A0PJX4 238 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 CD8B2A6NJW9 211 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 TAF4O00268 1085 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 GABRPO00591 440 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 TGM6O95932 706 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 ADRB1P08588 477 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 CD8BP10966 210 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 ZNF823P16415 610 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 FGF9P31371 208 aaPredicted RBP12.77□□□□□ -0.36
COL4A6-206ENST00000477085 RPS19P39019 145 aaKnown RBP12.77□□□□□ -0.36
COL4A6-206ENST00000477085 SERPINB10P48595 397 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 TAS2R43P59537 309 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 RPS11P62280 158 aaKnown RBP eCLIP12.77□□□□□ -0.36
COL4A6-206ENST00000477085 KCNMB1Q16558 191 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 USP43Q70EL4 1123 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 AAED1Q7RTV5 226 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 KCTD20Q7Z5Y7 419 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 TUSC5Q8IXB3 177 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 YIPF7Q8N8F6 280 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 OR10S1Q8NGN2 331 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 FNDC8Q8TC99 324 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 NABP1Q96AH0 204 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 PDCD1LG2Q9BQ51 273 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 ELOVL3Q9HB03 270 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 POLE4Q9NR33 117 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 PLSCR2Q9NRY7 297 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 FRRS1LQ9P0K9 344 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 CLEC4AQ9UMR7 237 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 LHX6Q9UPM6 363 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 RCE1Q9Y256 329 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 LHFPL6Q9Y693 200 aa12.77□□□□□ -0.36
COL4A6-206ENST00000477085 RRP8O43159 456 aaKnown RBP12.76□□□□□ -0.37
COL4A6-206ENST00000477085 SC5DO75845 299 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 SYNGR4O95473 234 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 PNPP00491 289 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 KRT8P05787 483 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 CAPZA2P47755 286 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 TGM4P49221 684 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 CCDC58Q4VC31 144 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 RPL22L1Q6P5R6 122 aaKnown RBP12.76□□□□□ -0.37
COL4A6-206ENST00000477085 FOXL2NBQ6ZUU3 175 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 ZNF679Q8IYX0 411 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 ZNF454Q8N9F8 522 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 OR52N5Q8NH56 324 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 ABHD4Q8TB40 342 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 TBC1D15Q8TC07 691 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 ASB17Q8WXJ9 295 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 TMEM45BQ96B21 275 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 INTS12Q96CB8 462 aaKnown RBP12.76□□□□□ -0.37
COL4A6-206ENST00000477085 SMIM19Q96E16 107 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 PAQR5Q9NXK6 330 aaPredicted RBP12.76□□□□□ -0.37
COL4A6-206ENST00000477085 IKZF2Q9UKS7 526 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 CAMK2AQ9UQM7 478 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 TRBV2A0A0J9YWF9 115 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 MKRN2OSH3BPM6 223 aa12.76□□□□□ -0.37
COL4A6-206ENST00000477085 PHYHO14832 338 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms