RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 INAFM1C9JVW0 142 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 SNAP29O95721 258 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 ADRA2AP08913 450 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 CSF3P09919 207 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 SLC25A16P16260 332 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 PCSK6P29122 969 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 EVX1P49640 407 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 PDLIM4P50479 330 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 ERVS71-1P61550 626 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 RPS23P62266 143 aaKnown RBP18.19■□□□□ 0.5
LIME1-204ENST00000476183 PSG4Q00888 419 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 MS4A2Q01362 244 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 PLP2Q04941 152 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 KRR1Q13601 381 aaKnown RBP18.19■□□□□ 0.5
LIME1-204ENST00000476183 TBC1D28Q2M2D7 210 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 ARHGAP24Q8N264 748 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 AKR7LQ8NHP1 331 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 NDEL1Q9GZM8 345 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 RAB1BQ9H0U4 201 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 DYNLRB1Q9NP97 96 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 KRCC1Q9NPI7 259 aaPredicted RBP18.19■□□□□ 0.5
LIME1-204ENST00000476183 FBXO9Q9UK97 447 aaPredicted RBP18.19■□□□□ 0.5
LIME1-204ENST00000476183 IER3IP1Q9Y5U9 82 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 VWC2LB2RUY7 222 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 XKRYO14609 159 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 PTHP01270 115 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 CST2P09228 141 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 CTLA4P16410 223 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 SDHAP31040 664 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 ENDOGQ14249 297 aaKnown RBP18.18■□□□□ 0.5
LIME1-204ENST00000476183 UGT2A3Q6UWM9 527 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 DPY19L2P2Q6ZN68 376 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 PTCHD4Q6ZW05 846 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 OR1J2Q8NGS2 313 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 POM121L2Q96KW2 1035 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 FOXN4Q96NZ1 517 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 ZNF416Q9BWM5 594 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 OR2H1Q9GZK4 316 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 WNT5BQ9H1J7 359 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 POLE4Q9NR33 117 aa18.18■□□□□ 0.5
LIME1-204ENST00000476183 LOC100509620A0A075B734 347 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 SOCS2O14508 198 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 SYNGR3O43761 229 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 AHCYL1O43865 530 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 OR10H3O60404 316 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 MSR1P21757 451 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 FPR3P25089 353 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 STOMP27105 288 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 APLNRP35414 380 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 ALDH3B1P43353 468 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 LOXL1Q08397 574 aaPredicted RBP18.17■□□□□ 0.5
LIME1-204ENST00000476183 MAD2L1BPQ15013 274 aaPredicted RBP18.17■□□□□ 0.5
LIME1-204ENST00000476183 CARTPTQ16568 116 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 GPR139Q6DWJ6 353 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 LCN8Q6JVE9 175 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 SMARCD3Q6STE5 483 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 FANK1Q8TC84 345 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 CLPTM1LQ96KA5 538 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 SYT4Q9H2B2 425 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 TPK1Q9H3S4 243 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 EMC7Q9NPA0 242 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 TAS2R1Q9NYW7 299 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 VSX1Q9NZR4 365 aaPredicted RBP18.17■□□□□ 0.5
LIME1-204ENST00000476183 REV1Q9UBZ9 1251 aa18.17■□□□□ 0.5
LIME1-204ENST00000476183 PPP1R3DO95685 299 aa18.16■□□□□ 0.5
LIME1-204ENST00000476183 TXNDC12O95881 172 aa18.16■□□□□ 0.5
LIME1-204ENST00000476183 CLPTM1O96005 669 aa18.16■□□□□ 0.5
LIME1-204ENST00000476183 CDKN2AP42771 156 aaKnown RBP18.16■□□□□ 0.5
LIME1-204ENST00000476183 MAGEA2P43356 314 aa18.16■□□□□ 0.5
LIME1-204ENST00000476183 GSSP48637 474 aa18.16■□□□□ 0.5
LIME1-204ENST00000476183 UCP2P55851 309 aa18.16■□□□□ 0.5
LIME1-204ENST00000476183 TRIM25Q14258 630 aaKnown RBP18.16■□□□□ 0.5
LIME1-204ENST00000476183 RFX4Q33E94 735 aa18.16■□□□□ 0.5
LIME1-204ENST00000476183 MTX3Q5HYI7 312 aa18.16■□□□□ 0.5
LIME1-204ENST00000476183 OTPQ5XKR4 325 aa18.16■□□□□ 0.5
LIME1-204ENST00000476183 RGS7BPQ6MZT1 257 aaPredicted RBP18.16■□□□□ 0.5
LIME1-204ENST00000476183 DHFR2Q86XF0 187 aa18.16■□□□□ 0.5
LIME1-204ENST00000476183 NEU4Q8WWR8 484 aaPredicted RBP18.16■□□□□ 0.5
LIME1-204ENST00000476183 LRMDAQ9H2I8 198 aa18.16■□□□□ 0.5
LIME1-204ENST00000476183 OR52D1Q9H346 318 aa18.16■□□□□ 0.5
LIME1-204ENST00000476183 DUSP13Q9UII6 198 aa18.16■□□□□ 0.5
LIME1-204ENST00000476183 TMCC3Q9ULS5 477 aa18.16■□□□□ 0.5
LIME1-204ENST00000476183 LYVE1Q9Y5Y7 322 aa18.16■□□□□ 0.5
LIME1-204ENST00000476183 LOC390937A0A1W2PQ73 354 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 M0R233 179 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 CD5LO43866 347 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 DAOP14920 347 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 CCNOP22674 350 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 WNT5AP41221 380 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 GUCA1AP43080 201 aaPredicted RBP18.15■□□□□ 0.5
LIME1-204ENST00000476183 RPS6KA3P51812 740 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 HMGA2P52926 109 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 TMEM249Q2WGJ8 235 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 ZNF774Q6NX45 483 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 C1orf94Q6P1W5 598 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 PGBD2Q6P3X8 592 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 ZNF101Q8IZC7 436 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 PIMREGQ9BSJ6 248 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 MUC13Q9H3R2 512 aa18.15■□□□□ 0.5
LIME1-204ENST00000476183 MYOZ1Q9NP98 299 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms