RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ADAMTSL4Q6UY14 1074 aa16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 KCTD9Q7L273 389 aa16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 VN1R4Q7Z5H5 301 aa16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 ELOA3Q8NG57 546 aa16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 CASTOR1Q8WTX7 329 aa16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 TSEN15Q8WW01 171 aaKnown RBP16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 MRGPRFQ96AM1 343 aa16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 STACQ99469 402 aa16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 WBP1LQ9NX94 342 aa16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 TMED7Q9Y3B3 224 aa16.83■□□□□ 0.28
ECHDC1-214ENST00000474289 OR52A4PA6NMU1 304 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 FBP1P09467 338 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 RCC1P18754 421 aaPredicted RBP16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 CCKBRP32239 447 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 SKP1P63208 163 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 FAM166AQ6J272 317 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 JAZF1Q86VZ6 243 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 SHISA5Q8N114 240 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 ZNF561Q8N587 486 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 KREMEN2Q8NCW0 462 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 GAL3ST3Q96A11 431 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 TVP23AA6NH52 213 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 RNASEK-C17orf49H0YIS7 233 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 MOSPD3O75425 235 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 CLN5O75503 358 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 HGFACQ04756 655 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 ASPHD2Q6ICH7 369 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 ULK3Q6PHR2 472 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 CORO6Q6QEF8 472 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 TMPPEQ6ZT21 453 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 CDC20BQ86Y33 519 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 ZSCAN4Q8NAM6 433 aaPredicted RBP16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 SLC41A2Q96JW4 573 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 CAPN10Q9HC96 672 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 DPP7Q9UHL4 492 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 LAMP5Q9UJQ1 280 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 DOCK9Q9BZ29 2069 aa16.82■□□□□ 0.28
ECHDC1-214ENST00000474289 A0A1W2PPC1 479 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 DCTN6O00399 190 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 KIR3DL2P43630 455 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 DEFB103AP81534 67 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 TOMM20Q15388 145 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 ISXQ2M1V0 245 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 TCEAL5Q5H9L2 206 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 LILRA6Q6PI73 481 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 PAPD4Q6PIY7 484 aaKnown RBP16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 SLCO5A1Q9H2Y9 848 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 DZANK1Q9NVP4 752 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 HEATR5AQ86XA9 2040 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 TRPM6Q9BX84 2022 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 TRBV6-7A0A0A0MS04 114 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 C5orf51A6NDU8 294 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 WRBO00258 174 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 DOK2O60496 412 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 OR8U8P0C7N1 319 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 ST6GAL1P15907 406 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 VAMP1P23763 118 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 ADAM8P78325 824 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 TGIF1Q15583 401 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 DEFB134Q4QY38 66 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 OR10K2Q6IF99 312 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 EXD3Q8N9H8 876 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 ZCCHC10Q8TBK6 192 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 FAM174AQ8TBP5 190 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 MICU1Q9BPX6 476 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 RNF126Q9BV68 326 aa16.81■□□□□ 0.28
ECHDC1-214ENST00000474289 C13orf42A0A1B0GVH6 325 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 C9JQL5 133 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 IGHV2-5P01817 119 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 RPS4XP62701 263 aaKnown RBP16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 RUNX2Q13950 521 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 ZNF425Q6IV72 752 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 TMEM151BQ8IW70 566 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 TRIM43Q96BQ3 446 aaPredicted RBP16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 ZC3H10Q96K80 434 aaKnown RBP16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 SMIM8Q96KF7 97 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 C4orf45Q96LM5 186 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 NECAB3Q96P71 396 aaPredicted RBP16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 SRA1Q9HD15 236 aaKnown RBP16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 MAFFQ9ULX9 164 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 KCNK6Q9Y257 313 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 RD3LP0DJH9 198 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 MAP3K8P41279 467 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 RASGEF1BQ0VAM2 473 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 FAM53BQ14153 422 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 ZNF77Q15935 545 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 MOGAT2Q3SYC2 334 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 WDR38Q5JTN6 314 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 DPY19L4Q7Z388 723 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 VWCEQ96DN2 955 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 MRPL38Q96DV4 380 aaKnown RBP16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 PRRT1Q99946 306 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 RAB11FIP5Q9BXF6 653 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 LMAN2LQ9H0V9 348 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 SLC2A8Q9NY64 477 aa16.8■□□□□ 0.28
ECHDC1-214ENST00000474289 TMEM235A6NFC5 223 aa16.79■□□□□ 0.28
ECHDC1-214ENST00000474289 MSGN1A6NI15 193 aa16.79■□□□□ 0.28
ECHDC1-214ENST00000474289 H0YIZ8 118 aa16.79■□□□□ 0.28
ECHDC1-214ENST00000474289 MT-ND4LP03901 98 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms