RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 GRHPRQ9UBQ7 328 aa15.41■□□□□ 0.06
UPF3A-203ENST00000474056 TEX13CA0A0J9YWL9 993 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 LOC390937A0A1W2PQ73 354 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 SLC22A23A1A5C7 686 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 DYNC1I1O14576 645 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 TLX2O43763 284 aaPredicted RBP15.4■□□□□ 0.06
UPF3A-203ENST00000474056 NDUFB2O95178 105 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 STAMBPO95630 424 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 SCG5P05408 212 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 ERCC1P07992 297 aaPredicted RBP15.4■□□□□ 0.06
UPF3A-203ENST00000474056 DAOP14920 347 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 ITGA2P17301 1181 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 LAP3P28838 519 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 APLNRP35414 380 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 NR4A2P43354 598 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 PSG4Q00888 419 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 FAM27BQ5VT28 67 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 PRIMA1Q86XR5 153 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 OR1J2Q8NGS2 313 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 AKR7LQ8NHP1 331 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 GPA33Q99795 319 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 BPESC1Q9GZL8 116 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 REV1Q9UBZ9 1251 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 IL20RAQ9UHF4 553 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 DUSP13Q9UII6 198 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 ADAM21Q9UKJ8 722 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 AURKCQ9UQB9 309 aa15.4■□□□□ 0.06
UPF3A-203ENST00000474056 XKRYO14609 159 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 IMPA2O14732 288 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 CRLF1O75462 422 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 GADD45GO95257 159 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 CLPTM1O96005 669 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 FABP3P05413 133 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 LCKP06239 509 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 CST2P09228 141 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 CCNOP22674 350 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 KRR1Q13601 381 aaKnown RBP15.39■□□□□ 0.05
UPF3A-203ENST00000474056 ENDOGQ14249 297 aaKnown RBP15.39■□□□□ 0.05
UPF3A-203ENST00000474056 ALKBH6Q3KRA9 238 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 C6orf52Q5T4I8 152 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 POM121L2Q96KW2 1035 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 GPX7Q96SL4 187 aaPredicted RBP15.39■□□□□ 0.05
UPF3A-203ENST00000474056 OR2H1Q9GZK4 316 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 NDEL1Q9GZM8 345 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 WNT5BQ9H1J7 359 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 KRCC1Q9NPI7 259 aaPredicted RBP15.39■□□□□ 0.05
UPF3A-203ENST00000474056 NRIP3Q9NQ35 241 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 POLE4Q9NR33 117 aa15.39■□□□□ 0.05
UPF3A-203ENST00000474056 LOC100509620A0A075B734 347 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 IGHV4-61A0A0C4DH41 118 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 A0A1W2PPW3 197 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 PRSS37A4D1T9 235 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 UNC119BA6NIH7 251 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 B2RBV5 119 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 LYNX1G3V0Z9 82 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 FAM107AO95990 144 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 IGHV4-31P0DP07 118 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 LYNX1P0DP58 116 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 CTLA4P16410 223 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 ZNF16P17020 682 aaPredicted RBP15.38■□□□□ 0.05
UPF3A-203ENST00000474056 ATP6V1B2P21281 511 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 MSR1P21757 451 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 STOMP27105 288 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 SDHAP31040 664 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 RRM2P31350 389 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 UCP2P55851 309 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 CYP2R1Q6VVX0 501 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 ZER1Q7Z7L7 766 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 ICA1LQ8NDH6 482 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 MCUR1Q96AQ8 359 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 NSL1Q96IY1 281 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 ZNF416Q9BWM5 594 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 BCL2L14Q9BZR8 327 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 LRMDAQ9H2I8 198 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 IER3IP1Q9Y5U9 82 aa15.38■□□□□ 0.05
UPF3A-203ENST00000474056 CUBNO60494 3623 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 IGLV3-9A0A075B6K5 115 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 A8MV72 311 aaPredicted RBP15.37■□□□□ 0.05
UPF3A-203ENST00000474056 NAT2P11245 290 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 ZNF250P15622 560 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 WNT5AP41221 380 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 GUCA1AP43080 201 aaPredicted RBP15.37■□□□□ 0.05
UPF3A-203ENST00000474056 RAD52P43351 418 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 MNAT1P51948 309 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 SMIM11AP58511 58 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 SPATS1Q496A3 300 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 ZNF774Q6NX45 483 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 UGT2A3Q6UWM9 527 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 PTCHD4Q6ZW05 846 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 ZDHHC21Q8IVQ6 265 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 ZNF101Q8IZC7 436 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 ZNF786Q8N393 782 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 CCDC197Q8NCU1 140 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 UBASH3BQ8TF42 649 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 SYT4Q9H2B2 425 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 MS4A5Q9H3V2 200 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 EMC7Q9NPA0 242 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 IL1RAPQ9NPH3 570 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 TAAR3PQ9P1P4 343 aa15.37■□□□□ 0.05
UPF3A-203ENST00000474056 C5orf49A4QMS7 147 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms