RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 UFD1Q92890 307 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 SFXN3Q9BWM7 321 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 JAM3Q9BX67 310 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 MROQ9BYG7 248 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 TTTY10Q9BZA0 68 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 C1orf198Q9H425 327 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 RNF121Q9H920 327 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 GPR35Q9HC97 309 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 POLE4Q9NR33 117 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 NDUFA13Q9P0J0 144 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 FOXD3Q9UJU5 478 aaPredicted RBP9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 GTF2A1LQ9UNN4 478 aa9.08□□□□□ -0.96
PRPF38A-202ENST00000474048 ARHGAP21Q5T5U3 1957 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 A0A1W2PQL4 384 aaPredicted RBP9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 TRIM64A6NGJ6 449 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 DVL2O14641 736 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 CNOT4O95628 575 aaKnown RBP9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 GPANK1O95872 356 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 H2BFMP0C1H6 154 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 CTSSP25774 331 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 CDAP32320 146 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 OPRM1P35372 400 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 RIDAP52758 137 aaKnown RBP9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 UBE2NP61088 152 aaKnown RBP9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 LSM6P62312 80 aaKnown RBP9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 MRPS34P82930 218 aaKnown RBP9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 EGR3Q06889 387 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 SCRN3Q0VDG4 424 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 MEP1BQ16820 701 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 TIMM50Q3ZCQ8 353 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 SLC36A2Q495M3 483 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 LINC01590Q5TEZ4 76 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 TMEM53Q6P2H8 277 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 C3P1Q6ZMU1 363 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 BEND4Q6ZU67 534 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 NUFIP2Q7Z417 695 aaKnown RBP9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 DCXRQ7Z4W1 244 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 DPPA2Q7Z7J5 298 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 CDC20BQ86Y33 519 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 LINC00346Q8IVM7 164 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 TIGD4Q8IY51 512 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 SYS1Q8N2H4 156 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 LRRC18Q8N456 261 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 NANOGP1Q8N7R0 232 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 GJC3Q8NFK1 279 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 OR52N5Q8NH56 324 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 LRRC46Q96FV0 321 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 C4orf36Q96KX1 117 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 WACQ9BTA9 647 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 MARCH7Q9H992 704 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 SIAEQ9HAT2 523 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 EMC7Q9NPA0 242 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 SLC7A10Q9NS82 523 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 CENPMQ9NSP4 180 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 TAS2R16Q9NYV7 291 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 TINAGQ9UJW2 476 aa9.07□□□□□ -0.96
PRPF38A-202ENST00000474048 METTL15A6NJ78 407 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 EEF1E1-BLOC1S5C9J1V9 151 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNF878C9JN71 531 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 EEF1E1O43324 174 aaKnown RBP9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 SEC14L2O76054 403 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 PTHP01270 115 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 TFP02787 698 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 LCKP06239 509 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 HTR1AP08908 422 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 GAAP10253 952 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 B4GALT1P15291 398 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 JUNBP17275 347 aaPredicted RBP9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 MPGP29372 298 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNF133P52736 654 aaPredicted RBP9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 PLP2Q04941 152 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 PMPCAQ10713 525 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 GTF3C1Q12789 2109 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 RAB39AQ14964 217 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNF829Q3KNS6 432 aaPredicted RBP9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 NRN1LQ496H8 165 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 TP53I3Q53FA7 332 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 ARMCX4Q5H9R4 360 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 TEX30Q5JUR7 227 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 C9orf135Q5VTT2 229 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 UBE2UQ5VVX9 321 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 LRFN4Q6PJG9 635 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 LYPD4Q6UWN0 246 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 NHLRC1Q6VVB1 395 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 DOLPP1Q86YN1 238 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 ALDH16A1Q8IZ83 802 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 SLC22A24Q8N4F4 322 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 SPRYD4Q8WW59 207 aaPredicted RBP9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 GATAD2BQ8WXI9 593 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 RND1Q92730 232 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 MUL1Q969V5 352 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 MGLLQ99685 303 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 PIGMQ9H3S5 423 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 TMEM38BQ9NVV0 291 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 COQ3Q9NZJ6 369 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 ASH2LQ9UBL3 628 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 MALT1Q9UDY8 824 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 ING1Q9UK53 422 aaPredicted RBP9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 SVILO95425 2214 aa9.06□□□□□ -0.96
PRPF38A-202ENST00000474048 FRYQ5TBA9 3013 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms