RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SERTM2A0A1B0GWG4 89 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 PVALEFA0A1B0GWK0 134 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 FUOMA2VDF0 154 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 FAM25EA8MYX2 175 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 SRRM5B3KS81 715 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 GFYI3L273 518 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 CCL21O00585 134 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 GOSR2O14653 212 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 AGPAT2O15120 278 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 PFDN6O15212 129 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 CLOCKO15516 846 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 RAD51CO43502 376 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 DFNA5O60443 496 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 CCDC22O60826 627 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 ENTPD5O75356 428 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 IGHV3-23P01764 117 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 RALBP11234 206 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 NPR2P20594 1047 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 M6PRP20645 277 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 ATP5C1P36542 298 aaKnown RBP3.17□□□□□ -1.9
BRCA1-212ENST00000473961 MAGEA1P43355 309 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 GSSP48637 474 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 KLK7P49862 253 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 RAB9AP51151 201 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 BCAP31P51572 246 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 DIO3P55073 304 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 NUP107P57740 925 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 RAB10P61026 200 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 DR1Q01658 176 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 MED21Q13503 144 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 ATP6AP1Q15904 470 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 ISXQ2M1V0 245 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 TNFAIP8L3Q5GJ75 292 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 TCTEX1D4Q5JR98 221 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 SLC25A30Q5SVS4 291 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 METTL21CQ5VZV1 264 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 TWF2Q6IBS0 349 aaKnown RBP3.17□□□□□ -1.9
BRCA1-212ENST00000473961 NIPAL1Q6NVV3 410 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 RWDD4Q6NW29 188 aaKnown RBP3.17□□□□□ -1.9
BRCA1-212ENST00000473961 ANGPTL8Q6UXH0 198 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 TMIGD1Q6UXZ0 262 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 C19orf35Q6ZS72 473 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 TMEM135Q86UB9 458 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 ZNF677Q86XU0 584 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 HPS6Q86YV9 775 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 C14orf178Q8N769 122 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-212ENST00000473961 BBS1Q8NFJ9 593 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 OR7G1Q8NGA0 311 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 OR2G2Q8NGZ5 317 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 ACTRT1Q8TDG2 376 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 SETD7Q8WTS6 366 aaKnown RBP3.17□□□□□ -1.9
BRCA1-212ENST00000473961 CCDC126Q96EE4 140 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 CMTM7Q96FZ5 175 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 ITCHQ96J02 903 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 MAGEB18Q96M61 343 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 CTRCQ99895 268 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 NAT9Q9BTE0 207 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 MRPS26Q9BYN8 205 aaKnown RBP3.17□□□□□ -1.9
BRCA1-212ENST00000473961 AUNIPQ9H7T9 357 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 GEMIN7Q9H840 131 aaKnown RBP3.17□□□□□ -1.9
BRCA1-212ENST00000473961 DDX18Q9NVP1 670 aaKnown RBP3.17□□□□□ -1.9
BRCA1-212ENST00000473961 MRPL22Q9NWU5 206 aaKnown RBP3.17□□□□□ -1.9
BRCA1-212ENST00000473961 VNN3Q9NY84 501 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 ZNF107Q9UII5 783 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-212ENST00000473961 UTP11Q9Y3A2 253 aaKnown RBP3.17□□□□□ -1.9
BRCA1-212ENST00000473961 KIAA0556O60303 1618 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 DEPDC5O75140 1603 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 TSPOAP1O95153 1857 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 MAP3K19Q56UN5 1328 aa3.17□□□□□ -1.9
BRCA1-212ENST00000473961 MAGI1Q96QZ7 1491 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-212ENST00000473961 MLH3Q9UHC1 1453 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 A0A1W2PP64 1363 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 PREX2Q70Z35 1606 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 ABCC1P33527 1531 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 NSG1A0A0A6YYJ2 146 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 A0A0D9SFI3 127 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 LOC105371267A0A1B0GV96 52 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 SMCO2A6NFE2 343 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 NCF1BA6NI72 391 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-212ENST00000473961 A6NIZ1 184 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 SYCE1LA8MT33 242 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 NCF1CA8MVU1 366 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-212ENST00000473961 BTNL10A8MVZ5 291 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 FKBP6O75344 327 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 OR2J3O76001 311 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 KRT75O95678 551 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 IGHV3-48P01763 117 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 OCM2P0CE71 109 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 OCMP0CE72 109 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-212ENST00000473961 STAG3L3P0CL85 134 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 HPGDP15428 266 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 PRKACBP22694 351 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 COX7A1P24310 79 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 RORAP35398 523 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 LONP1P36776 959 aaKnown RBP3.16□□□□□ -1.9
BRCA1-212ENST00000473961 TFPI2P48307 235 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 EIF2B2P49770 351 aaKnown RBP3.16□□□□□ -1.9
BRCA1-212ENST00000473961 RAP1GDS1P52306 607 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 STX17P56962 302 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 RAP1BP61224 184 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms