RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 ZNF224Q9NZL3 707 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 IL20RAQ9UHF4 553 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 ADAM18Q9Y3Q7 739 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 FN1P02751 2386 aaKnown RBP9.95□□□□□ -0.82
CPNE1-222ENST00000473373 HIVEP2P31629 2446 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 C5orf49A4QMS7 147 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 C12orf71A8MTZ7 269 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 SYNGR3O43761 229 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 PRSS23O95084 383 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 MT-ND5P03915 603 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 ZNF35P13682 527 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 DAOP14920 347 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 FUT4P22083 530 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 USF1P22415 310 aaPredicted RBP9.94□□□□□ -0.82
CPNE1-222ENST00000473373 STOMP27105 288 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 LAP3P28838 519 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 GCH1P30793 250 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 ALDH3B1P43353 468 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 KLF3P57682 345 aaPredicted RBP9.94□□□□□ -0.82
CPNE1-222ENST00000473373 SPATS1Q496A3 300 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 GPR139Q6DWJ6 353 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 TMEM154Q6P9G4 183 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 DNM1P34Q6PK57 102 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 SLC25A47Q6Q0C1 308 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 DHFR2Q86XF0 187 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 ZCCHC24Q8N2G6 241 aaKnown RBP9.94□□□□□ -0.82
CPNE1-222ENST00000473373 FITM2Q8N6M3 262 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 ZNF540Q8NDQ6 660 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 OR1J1Q8NGS3 322 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 AKR7LQ8NHP1 331 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 SYNPRQ8TBG9 265 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 CCDC124Q96CT7 223 aaKnown RBP9.94□□□□□ -0.82
CPNE1-222ENST00000473373 FOXN4Q96NZ1 517 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 MRPL37Q9BZE1 423 aaKnown RBP9.94□□□□□ -0.82
CPNE1-222ENST00000473373 BCL2L14Q9BZR8 327 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 REV1Q9UBZ9 1251 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 IER3IP1Q9Y5U9 82 aa9.94□□□□□ -0.82
CPNE1-222ENST00000473373 JMJD1CQ15652 2540 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 IGKV1D-43A0A0B4J1Z2 117 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 LOC390937A0A1W2PQ73 354 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 NDUFS8O00217 210 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 SLC16A7O60669 478 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 PPP1R3DO95685 299 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 RENP00797 406 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 TSPAN19P0C672 248 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 APEHP13798 732 aaKnown RBP9.93□□□□□ -0.82
CPNE1-222ENST00000473373 SDHAP31040 664 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 SLC6A6P31641 620 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 ARHGDIAP52565 204 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 MAD2L1BPQ15013 274 aaPredicted RBP9.93□□□□□ -0.82
CPNE1-222ENST00000473373 FAM98BQ52LJ0 330 aaKnown RBP9.93□□□□□ -0.82
CPNE1-222ENST00000473373 MTX3Q5HYI7 312 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 SMARCD3Q6STE5 483 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 ARL9Q6T311 187 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 CXXC5Q7LFL8 322 aaKnown RBP9.93□□□□□ -0.82
CPNE1-222ENST00000473373 ZNF584Q8IVC4 421 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 ARHGAP24Q8N264 748 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 LRRC75AQ8NAA5 344 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 OR52L1Q8NGH7 329 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 SPATA3Q8NHX4 192 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 ZNF519Q8TB69 540 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 C10orf105Q8TEF2 133 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 UBASH3BQ8TF42 649 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 C7orf34Q96L11 122 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 ERMAPQ96PL5 475 aaPredicted RBP9.93□□□□□ -0.82
CPNE1-222ENST00000473373 DOK1Q99704 481 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 IFT27Q9BW83 186 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 TRIM15Q9C019 465 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 SYT4Q9H2B2 425 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 MUC13Q9H3R2 512 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 TAAR3PQ9P1P4 343 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 ACTR3BQ9P1U1 418 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 CD300AQ9UGN4 299 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 ADAM21Q9UKJ8 722 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 SIGLEC7Q9Y286 467 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 TIMM10BQ9Y5J6 103 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 CSPG4Q6UVK1 2322 aa9.93□□□□□ -0.82
CPNE1-222ENST00000473373 TLN2Q9Y4G6 2542 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 FBN1P35555 2871 aaKnown RBP9.92□□□□□ -0.82
CPNE1-222ENST00000473373 PRSS37A4D1T9 235 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 TNFRSF11BO00300 401 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 TLX2O43763 284 aaPredicted RBP9.92□□□□□ -0.82
CPNE1-222ENST00000473373 CD5LO43866 347 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 DOK2O60496 412 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 KHDRBS3O75525 346 aaKnown RBP9.92□□□□□ -0.82
CPNE1-222ENST00000473373 HLA-DQA2P01906 255 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 CST2P09228 141 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 NAT2P11245 290 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 OMPP47874 163 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 HTR5AP47898 357 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 EVX1P49640 407 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 UCP2P55851 309 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 GLO1Q04760 184 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 SCRN3Q0VDG4 424 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 SEC23BQ15437 767 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 MOGQ16653 247 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 ZNF718Q3SXZ3 478 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 MESTQ5EB52 335 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 SPATA46Q5T0L3 261 aa9.92□□□□□ -0.82
CPNE1-222ENST00000473373 FAM27BQ5VT28 67 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms