RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 GCH1P30793 250 aa16.73■□□□□ 0.27
COMMD1-208ENST00000472729 MSX2P35548 267 aaPredicted RBP16.73■□□□□ 0.27
COMMD1-208ENST00000472729 FXNQ16595 210 aa16.73■□□□□ 0.27
COMMD1-208ENST00000472729 GPR139Q6DWJ6 353 aa16.73■□□□□ 0.27
COMMD1-208ENST00000472729 TMEM154Q6P9G4 183 aa16.73■□□□□ 0.27
COMMD1-208ENST00000472729 CLDN22Q8N7P3 220 aa16.73■□□□□ 0.27
COMMD1-208ENST00000472729 LRRC75AQ8NAA5 344 aa16.73■□□□□ 0.27
COMMD1-208ENST00000472729 ZNF519Q8TB69 540 aa16.73■□□□□ 0.27
COMMD1-208ENST00000472729 RSRC1Q96IZ7 334 aaKnown RBP16.73■□□□□ 0.27
COMMD1-208ENST00000472729 C7orf34Q96L11 122 aa16.73■□□□□ 0.27
COMMD1-208ENST00000472729 ADAM21Q9UKJ8 722 aa16.73■□□□□ 0.27
COMMD1-208ENST00000472729 ADAM18Q9Y3Q7 739 aa16.73■□□□□ 0.27
COMMD1-208ENST00000472729 UGT2A1Q9Y4X1 527 aa16.73■□□□□ 0.27
COMMD1-208ENST00000472729 CSPG4Q6UVK1 2322 aa16.72■□□□□ 0.27
COMMD1-208ENST00000472729 PLCE1Q9P212 2302 aa16.72■□□□□ 0.27
COMMD1-208ENST00000472729 TRBV4-1A0A0J9YWV2 114 aa16.72■□□□□ 0.27
COMMD1-208ENST00000472729 B2RBV5 119 aa16.72■□□□□ 0.27
COMMD1-208ENST00000472729 H7C1C5 153 aa16.72■□□□□ 0.27
COMMD1-208ENST00000472729 ARPC2O15144 300 aa16.72■□□□□ 0.27
COMMD1-208ENST00000472729 OR10H3O60404 316 aa16.72■□□□□ 0.27
COMMD1-208ENST00000472729 CST2P09228 141 aa16.72■□□□□ 0.27
COMMD1-208ENST00000472729 MMP7P09237 267 aaPredicted RBP16.72■□□□□ 0.27
COMMD1-208ENST00000472729 LCN6P62502 163 aa16.72■□□□□ 0.27
COMMD1-208ENST00000472729 FAM86B1Q8N7N1 296 aa16.72■□□□□ 0.27
COMMD1-208ENST00000472729 CCDC197Q8NCU1 140 aa16.72■□□□□ 0.27
COMMD1-208ENST00000472729 OR1J1Q8NGS3 322 aa16.72■□□□□ 0.27
COMMD1-208ENST00000472729 NMD3Q96D46 503 aaKnown RBP16.72■□□□□ 0.27
COMMD1-208ENST00000472729 NSL1Q96IY1 281 aa16.72■□□□□ 0.27
COMMD1-208ENST00000472729 Q96M85 177 aa16.72■□□□□ 0.27
COMMD1-208ENST00000472729 TAAR3PQ9P1P4 343 aa16.72■□□□□ 0.27
COMMD1-208ENST00000472729 NIPBLQ6KC79 2804 aaeCLIP16.72■□□□□ 0.27
COMMD1-208ENST00000472729 IGKV1D-43A0A0B4J1Z2 117 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 TEX13CA0A0J9YWL9 993 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 PRSS37A4D1T9 235 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 TPD52L2O43399 206 aaKnown RBP16.71■□□□□ 0.27
COMMD1-208ENST00000472729 IFNA2P01563 188 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 SDHAP31040 664 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 CENPAP49450 140 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 ARHGDIAP52565 204 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 PSG4Q00888 419 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 KRTAP1-1Q07627 177 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 KRR1Q13601 381 aaKnown RBP16.71■□□□□ 0.27
COMMD1-208ENST00000472729 MAD2L1BPQ15013 274 aaPredicted RBP16.71■□□□□ 0.27
COMMD1-208ENST00000472729 CHRFAM7AQ494W8 412 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 C6orf52Q5T4I8 152 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 SMARCD3Q6STE5 483 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 DPY19L2P2Q6ZN68 376 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 ADCK1Q86TW2 530 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 LRP11Q86VZ4 500 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 C1orf174Q8IYL3 243 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 ZNF786Q8N393 782 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 PAQR4Q8N4S7 273 aaPredicted RBP16.71■□□□□ 0.27
COMMD1-208ENST00000472729 CPEB3Q8NE35 698 aaKnown RBP16.71■□□□□ 0.27
COMMD1-208ENST00000472729 AKR7LQ8NHP1 331 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 NABP1Q96AH0 204 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 WACQ9BTA9 647 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 OR2H1Q9GZK4 316 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 BPESC1Q9GZL8 116 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 CD300AQ9UGN4 299 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 IL20RAQ9UHF4 553 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 SIGLEC7Q9Y286 467 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 IER3IP1Q9Y5U9 82 aa16.71■□□□□ 0.27
COMMD1-208ENST00000472729 HEATR1Q9H583 2144 aaKnown RBP16.7■□□□□ 0.26
COMMD1-208ENST00000472729 SLC16A7O60669 478 aa16.7■□□□□ 0.26
COMMD1-208ENST00000472729 FAM107AO95990 144 aa16.7■□□□□ 0.26
COMMD1-208ENST00000472729 NAT2P11245 290 aa16.7■□□□□ 0.26
COMMD1-208ENST00000472729 NOS3P29474 1203 aa16.7■□□□□ 0.26
COMMD1-208ENST00000472729 OMPP47874 163 aa16.7■□□□□ 0.26
COMMD1-208ENST00000472729 CHN2P52757 468 aa16.7■□□□□ 0.26
COMMD1-208ENST00000472729 SCRN3Q0VDG4 424 aa16.7■□□□□ 0.26
COMMD1-208ENST00000472729 ALKBH6Q3KRA9 238 aa16.7■□□□□ 0.26
COMMD1-208ENST00000472729 ZNF718Q3SXZ3 478 aa16.7■□□□□ 0.26
COMMD1-208ENST00000472729 DNM1P34Q6PK57 102 aa16.7■□□□□ 0.26
COMMD1-208ENST00000472729 TSEN54Q7Z6J9 526 aaKnown RBP16.7■□□□□ 0.26
COMMD1-208ENST00000472729 SYT9Q86SS6 491 aa16.7■□□□□ 0.26
COMMD1-208ENST00000472729 JAZF1Q86VZ6 243 aa16.7■□□□□ 0.26
COMMD1-208ENST00000472729 ARHGAP24Q8N264 748 aa16.7■□□□□ 0.26
COMMD1-208ENST00000472729 ELOVL3Q9HB03 270 aa16.7■□□□□ 0.26
COMMD1-208ENST00000472729 HINT3Q9NQE9 182 aaKnown RBP16.7■□□□□ 0.26
COMMD1-208ENST00000472729 CDC42EP3Q9UKI2 254 aa16.7■□□□□ 0.26
COMMD1-208ENST00000472729 NDRG4Q9ULP0 352 aaKnown RBP16.7■□□□□ 0.26
COMMD1-208ENST00000472729 LOC100289279A0A1B0GTE1 492 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 PLSCR5A0PG75 271 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 VWC2LB2RUY7 222 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 SOCS2O14508 198 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 PTP4A3O75365 173 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 KHDRBS3O75525 346 aaKnown RBP16.69■□□□□ 0.26
COMMD1-208ENST00000472729 RRM2P31350 389 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 SLC6A6P31641 620 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 FHL1Q13642 323 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 SEC23BQ15437 767 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 PCGF3Q3KNV8 242 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 MESTQ5EB52 335 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 FAM166AQ6J272 317 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 ZDHHC21Q8IVQ6 265 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 GLB1L2Q8IW92 636 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 FANK1Q8TC84 345 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 RDH5Q92781 318 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 ZNF416Q9BWM5 594 aa16.69■□□□□ 0.26
COMMD1-208ENST00000472729 BEX2Q9BXY8 128 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms