RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PEX2P28328 305 aa3□□□□□ -1.93
XRN1-209ENST00000472625 ARRB2P32121 409 aa3□□□□□ -1.93
XRN1-209ENST00000472625 S100A3P33764 101 aa3□□□□□ -1.93
XRN1-209ENST00000472625 MYBPC1Q00872 1141 aa3□□□□□ -1.93
XRN1-209ENST00000472625 ROR2Q01974 943 aaKnown RBP3□□□□□ -1.93
XRN1-209ENST00000472625 NPRL3Q12980 569 aa3□□□□□ -1.93
XRN1-209ENST00000472625 FADDQ13158 208 aa3□□□□□ -1.93
XRN1-209ENST00000472625 CASP8Q14790 479 aa3□□□□□ -1.93
XRN1-209ENST00000472625 FAM174BQ3ZCQ3 159 aa3□□□□□ -1.93
XRN1-209ENST00000472625 SLC36A2Q495M3 483 aa3□□□□□ -1.93
XRN1-209ENST00000472625 GLIPR1L2Q4G1C9 344 aa3□□□□□ -1.93
XRN1-209ENST00000472625 MRPL2Q5T653 305 aaKnown RBP3□□□□□ -1.93
XRN1-209ENST00000472625 C9orf135Q5VTT2 229 aa3□□□□□ -1.93
XRN1-209ENST00000472625 FAM91A1Q658Y4 838 aa3□□□□□ -1.93
XRN1-209ENST00000472625 OR4F3Q6IEY1 312 aa3□□□□□ -1.93
XRN1-209ENST00000472625 ACSM5Q6NUN0 579 aa3□□□□□ -1.93
XRN1-209ENST00000472625 TMEM154Q6P9G4 183 aa3□□□□□ -1.93
XRN1-209ENST00000472625 C6orf89Q6UWU4 347 aa3□□□□□ -1.93
XRN1-209ENST00000472625 IL17RELQ6ZVW7 336 aa3□□□□□ -1.93
XRN1-209ENST00000472625 CREB3L2Q70SY1 520 aa3□□□□□ -1.93
XRN1-209ENST00000472625 RANBP3LQ86VV4 465 aaPredicted RBP3□□□□□ -1.93
XRN1-209ENST00000472625 RNF130Q86XS8 419 aa3□□□□□ -1.93
XRN1-209ENST00000472625 KRT73Q86Y46 540 aa3□□□□□ -1.93
XRN1-209ENST00000472625 UEVLDQ8IX04 471 aa3□□□□□ -1.93
XRN1-209ENST00000472625 SLC15A3Q8IY34 581 aa3□□□□□ -1.93
XRN1-209ENST00000472625 IZUMO1Q8IYV9 350 aa3□□□□□ -1.93
XRN1-209ENST00000472625 C4orf33Q8N1A6 199 aa3□□□□□ -1.93
XRN1-209ENST00000472625 CADM2Q8N3J6 435 aa3□□□□□ -1.93
XRN1-209ENST00000472625 SVOPLQ8N434 492 aa3□□□□□ -1.93
XRN1-209ENST00000472625 KRTCAP2Q8N6L1 136 aa3□□□□□ -1.93
XRN1-209ENST00000472625 ARIH2OSQ8N7S6 290 aa3□□□□□ -1.93
XRN1-209ENST00000472625 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3□□□□□ -1.93
XRN1-209ENST00000472625 OR1J2Q8NGS2 313 aa3□□□□□ -1.93
XRN1-209ENST00000472625 OR6S1Q8NH40 331 aa3□□□□□ -1.93
XRN1-209ENST00000472625 RP9Q8TA86 221 aaKnown RBP3□□□□□ -1.93
XRN1-209ENST00000472625 BBS10Q8TAM1 723 aa3□□□□□ -1.93
XRN1-209ENST00000472625 NANPQ8TBE9 248 aa3□□□□□ -1.93
XRN1-209ENST00000472625 AGR3Q8TD06 166 aa3□□□□□ -1.93
XRN1-209ENST00000472625 HTRA1Q92743 480 aa3□□□□□ -1.93
XRN1-209ENST00000472625 BCL2L2Q92843 193 aaPredicted RBP3□□□□□ -1.93
XRN1-209ENST00000472625 RAB1CQ92928 201 aa3□□□□□ -1.93
XRN1-209ENST00000472625 SPSB4Q96A44 273 aa3□□□□□ -1.93
XRN1-209ENST00000472625 ELMOD3Q96FG2 381 aa3□□□□□ -1.93
XRN1-209ENST00000472625 AURKBQ96GD4 344 aaPredicted RBP3□□□□□ -1.93
XRN1-209ENST00000472625 RITA1Q96K30 269 aa3□□□□□ -1.93
XRN1-209ENST00000472625 LRR1Q96L50 414 aa3□□□□□ -1.93
XRN1-209ENST00000472625 OXGR1Q96P68 337 aa3□□□□□ -1.93
XRN1-209ENST00000472625 ZNF385AQ96PM9 386 aaKnown RBP3□□□□□ -1.93
XRN1-209ENST00000472625 GPA33Q99795 319 aa3□□□□□ -1.93
XRN1-209ENST00000472625 C1QTNF6Q9BXI9 259 aa3□□□□□ -1.93
XRN1-209ENST00000472625 PLA2G12AQ9BZM1 189 aa3□□□□□ -1.93
XRN1-209ENST00000472625 ULBP2Q9BZM5 246 aa3□□□□□ -1.93
XRN1-209ENST00000472625 BCL2L14Q9BZR8 327 aa3□□□□□ -1.93
XRN1-209ENST00000472625 SLC19A3Q9BZV2 496 aa3□□□□□ -1.93
XRN1-209ENST00000472625 ROPN1BQ9BZX4 212 aaPredicted RBP3□□□□□ -1.93
XRN1-209ENST00000472625 OR11A1Q9GZK7 315 aa3□□□□□ -1.93
XRN1-209ENST00000472625 EGLN1Q9GZT9 426 aa3□□□□□ -1.93
XRN1-209ENST00000472625 ZNF696Q9H7X3 374 aa3□□□□□ -1.93
XRN1-209ENST00000472625 ROPN1Q9HAT0 212 aaPredicted RBP3□□□□□ -1.93
XRN1-209ENST00000472625 A4GALTQ9NPC4 353 aa3□□□□□ -1.93
XRN1-209ENST00000472625 DDX28Q9NUL7 540 aaKnown RBP3□□□□□ -1.93
XRN1-209ENST00000472625 POFUT2Q9Y2G5 429 aa3□□□□□ -1.93
XRN1-209ENST00000472625 RAP2CQ9Y3L5 183 aa3□□□□□ -1.93
XRN1-209ENST00000472625 RTTNQ86VV8 2226 aa3□□□□□ -1.93
XRN1-209ENST00000472625 MEGF8Q7Z7M0 2845 aa3□□□□□ -1.93
XRN1-209ENST00000472625 FREM3P0C091 2139 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 TRAV36DV7A0A075B6V5 113 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 A0A1B0GUS0 222 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 IQCMA0A1B0GVH7 501 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 A0A1W2PPM1 405 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 LRP5LA4QPB2 252 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ZNF726A6NNF4 738 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 CENPBD1B2RD01 187 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 TPD52L2O43399 206 aaKnown RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 PPIHO43447 177 aaKnown RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 NPIPB7O75200 414 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 FOXH1O75593 365 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 SERPINB7O75635 380 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 LY6HO94772 140 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 OR6A2O95222 327 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 CPSF4O95639 269 aaKnown RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 SNAP29O95721 258 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 BPGMP07738 259 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ADRA2AP08913 450 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ZCCHC18P0CG32 403 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 CD79AP11912 226 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ETS2P15036 469 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ADRA2CP18825 462 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 BTF3P20290 206 aaKnown RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 TUBG1P23258 451 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 ALDH3A1P30838 453 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 PRKAR1BP31321 381 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 THBS4P35443 961 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 CRATP43155 626 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 RAD52P43351 418 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 CSNK1A1P48729 337 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 RPL14P50914 215 aaKnown RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 CLDN17P56750 224 aa2.99□□□□□ -1.93
XRN1-209ENST00000472625 KLF3P57682 345 aaPredicted RBP2.99□□□□□ -1.93
XRN1-209ENST00000472625 DSTNP60981 165 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms