RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 IGKV2D-24A0A075B6R9 120 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 A0A1B0GVX0 72 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 CTAGE15A4D2H0 777 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 SIRPB1O00241 398 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 NDUFAB1O14561 156 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 RTL8CO15255 209 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 CHST1O43916 411 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 DPM1O60762 260 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 ZNF324O75467 553 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-209ENST00000472044 MED6O75586 246 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 WISP3O95389 354 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-209ENST00000472044 FTH1P02794 183 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 ZNF250P15622 560 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 ZNF823P16415 610 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 RRM2P31350 389 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 GPX4P36969 197 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-209ENST00000472044 CDKN2BP42772 138 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 RAB10P61026 200 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 BEX3Q00994 111 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 C16orf72Q14CZ0 275 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 CHRNA6Q15825 494 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 C9orf135Q5VTT2 229 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 OAFQ86UD1 273 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 CTAGE6Q86UF2 777 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 IQCKQ8N0W5 287 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 TTC5Q8N0Z6 440 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 BBS5Q8N3I7 341 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 SLC7A13Q8TCU3 470 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 SLC29A1Q99808 456 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 PATZ1Q9HBE1 687 aaKnown RBP2.31□□□□□ -2.04
PTCD3-209ENST00000472044 UXTQ9UBK9 157 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-209ENST00000472044 LGALS13Q9UHV8 139 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 NSD2O96028 1365 aa2.31□□□□□ -2.04
PTCD3-209ENST00000472044 COL22A1Q8NFW1 1626 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-209ENST00000472044 NUP214P35658 2090 aaPredicted RBP2.3□□□□□ -2.04
PTCD3-209ENST00000472044 CIB4A0PJX0 185 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 TCP11X1B4DZS4 312 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 AIM2O14862 343 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 KLHL41O60662 606 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 OR2J3O76001 311 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 SERPINA5P05154 406 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 ANXA5P08758 320 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 RAB3BP20337 219 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 SLC1A1P43005 524 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 NAMPTP43490 491 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 RPS9P46781 194 aaKnown RBP2.3□□□□□ -2.04
PTCD3-209ENST00000472044 FAM83EQ2M2I3 478 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 PGGHGQ32M88 737 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 KRTAP13-3Q3SY46 172 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 HSP90AB3PQ58FF7 597 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 THEM4Q5T1C6 240 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 PRAMEF20Q5VT98 475 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 KHDRBS2Q5VWX1 349 aaKnown RBP2.3□□□□□ -2.04
PTCD3-209ENST00000472044 REEP3Q6NUK4 255 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 SCD5Q86SK9 330 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 CNPY4Q8N129 248 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 OR2A1Q8NGT9 310 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 ZNF502Q8TBZ5 544 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 STARD4Q96DR4 205 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 CHP1Q99653 195 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 LZTS2Q9BRK4 669 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 ANKRA2Q9H9E1 313 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 TMEM165Q9HC07 324 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 NEK6Q9HC98 313 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 DCAF16Q9NXF7 216 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 ST3GAL6Q9Y274 331 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 KCNE3Q9Y6H6 103 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 DOCK9Q9BZ29 2069 aa2.3□□□□□ -2.04
PTCD3-209ENST00000472044 MROH7-TTC4A0A0A0MT08 1334 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 IGLV1-50A0A075B6I6 118 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 TRBV9A0A0B4J1U6 114 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 IGHV5-10-1A0A0J9YXX1 117 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 RP2O75695 350 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 OR2F2O95006 317 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 FABP3P05413 133 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 PRPS2P11908 318 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 F2RP25116 425 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 MAS1LP35410 378 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 CEACAM6P40199 344 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 CSNK1A1P48729 337 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 CX3CR1P49238 355 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 ZNF138P52744 262 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 LINC00315P59091 139 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 ERCC8Q13216 396 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 GINS1Q14691 196 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 MRPL23Q16540 153 aaKnown RBP2.29□□□□□ -2.04
PTCD3-209ENST00000472044 ZSCAN26Q16670 478 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 C22orf42Q6IC83 251 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 SLC16A14Q7RTX9 510 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 BIVMQ86UB2 503 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 H1FOOQ8IZA3 346 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-209ENST00000472044 CYB561D1Q8N8Q1 229 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 PRELID2Q8N945 189 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 OR10G2Q8NGC3 310 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 OR4A4PQ8NGN8 299 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 UBALD1Q8TB05 177 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 MCUR1Q96AQ8 359 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 DNAJC1Q96KC8 554 aaKnown RBP2.29□□□□□ -2.04
PTCD3-209ENST00000472044 ZNF681Q96N22 645 aa2.29□□□□□ -2.04
PTCD3-209ENST00000472044 C20orf24Q9BUV8 137 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms