RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 SLC39A11Q8N1S5 342 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 L3HYPDHQ96EM0 354 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ZNF582Q96NG8 517 aaPredicted RBP12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 KLF16Q9BXK1 252 aaPredicted RBP12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ZNFX1Q9P2E3 1918 aaKnown RBP12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 DYSFO75923 2080 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TMED7-TICAM2A0A0A6YYA0 188 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PPP6CO00743 305 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 P2RX6O15547 441 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SYT6Q5T7P8 510 aaPredicted RBP12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SLC35F3Q8IY50 421 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TMED7Q9Y3B3 224 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 C3P01024 1663 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SLX4Q8IY92 1834 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CATSPERDQ86XM0 798 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 EDEM2Q9BV94 578 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SLC23A1Q9UHI7 598 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PTBP3O95758 552 aaKnown RBP12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 NFYAP23511 347 aaPredicted RBP12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RPS16P62249 146 aaKnown RBP12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RTL6Q6ICC9 239 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PRAMEF25A6NGN4 478 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 GABRPO00591 440 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PPIAP62937 165 aaKnown RBP12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 GLYATL3Q5SZD4 288 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PRAMEF5Q5TYX0 476 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PRAMEF6Q5VXH4 476 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 B3GNTL1Q67FW5 361 aaPredicted RBP12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 LYPD4Q6UWN0 246 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SCD5Q86SK9 330 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OR51A4Q8NGJ6 313 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OR51A2Q8NGJ7 313 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 MCOLN1Q9GZU1 580 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ADGRB2O60241 1585 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 IFT172Q9UG01 1749 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PHOX2AO14813 284 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RGS11O94810 467 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PGGHGQ32M88 737 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 GAREM2Q75VX8 874 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SLC29A1Q99808 456 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 IL17CQ9P0M4 197 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 M0QYG6 137 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CYTIPO60759 359 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 NUDT1P36639 197 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SELPLGQ14242 412 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CLVS2Q5SYC1 327 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ZNF574Q6ZN55 896 aaPredicted RBP12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 DCXRQ7Z4W1 244 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OR56B1Q8NGI3 324 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PLPPR2Q96GM1 343 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 HSD3B7Q9H2F3 369 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OR52A1Q9UKL2 312 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 FGF4P08620 206 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 NPY4RP50391 375 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PDZD11Q5EBL8 140 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 HAPLN2Q9GZV7 340 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SLC2A9Q9NRM0 540 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 USF1P22415 310 aaPredicted RBP12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TNFRSF17Q02223 184 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 BTN1A1Q13410 526 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 GK3PQ14409 553 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 STEAP1BQ6NZ63 245 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CORO6Q6QEF8 472 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CDH26Q8IXH8 852 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RASD2Q96D21 266 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 METTL17Q9H7H0 456 aaPredicted RBP12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 HES4Q9HCC6 221 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 FAM212BQ9NTI7 297 aaPredicted RBP12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SNED1Q8TER0 1413 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 MRC1P22897 1456 aa12.19□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 MYOFQ9NZM1 2061 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 A0A0B4J203 849 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 H3BVH4 76 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 UBBP0CG47 229 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TMEM97Q5BJF2 176 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PRR27Q6MZM9 219 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 WDR5BQ86VZ2 330 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OR10K1Q8NGX5 313 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 HRH3Q9Y5N1 445 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ANKRD34AQ69YU3 496 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 LCN8Q6JVE9 175 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 C6orf15Q6UXA7 325 aaPredicted RBP12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 GFRALQ6UXV0 394 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 HTR3DQ70Z44 454 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SFT2D1Q8WV19 159 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ZFPM2Q8WW38 1151 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TMEM181Q9P2C4 612 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RGPD2P0DJD1 1756 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 HLA-HP01893 362 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PLXDC2Q6UX71 529 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SOX7Q9BT81 388 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 MEX3AA1L020 520 aaKnown RBP12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 UNCXA6NJT0 531 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ARPC3O15145 178 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 MYF6P23409 242 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 HTR2CP28335 458 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RBP2P50120 134 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RTL8BQ17RB0 113 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OR13H1Q8NG92 308 aa12.18□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ZNF596Q8TC21 504 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms