RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 SNX5Q9Y5X3 404 aa11.7□□□□□ -0.54
HMGN1-211ENST00000471260 JMJD1CQ15652 2540 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 IGHV2OR16-5A0A0B4J2B6 119 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 C11orf98E9PRG8 122 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 E2F6O75461 281 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 SEMG1P04279 462 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 ERCC1P07992 297 aaPredicted RBP11.69□□□□□ -0.54
HMGN1-211ENST00000471260 IFNGR1P15260 489 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 RBM34P42696 430 aaKnown RBP11.69□□□□□ -0.54
HMGN1-211ENST00000471260 CAPZA2P47755 286 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 CSNK1A1P48729 337 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 PDLIM4P50479 330 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 IDH3GP51553 393 aaPredicted RBP11.69□□□□□ -0.54
HMGN1-211ENST00000471260 CRYBA2P53672 197 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 BIDP55957 195 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 HGFACQ04756 655 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 TMEM249Q2WGJ8 235 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 ZNF829Q3KNS6 432 aaPredicted RBP11.69□□□□□ -0.54
HMGN1-211ENST00000471260 C6orf141Q5SZD1 244 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 TBPL2Q6SJ96 375 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 ZNF813Q6ZN06 617 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 SLC35D2Q76EJ3 337 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 SLC46A3Q7Z3Q1 461 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 ZNF540Q8NDQ6 660 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 HTRA1Q92743 480 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 TMEM54Q969K7 222 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 MUL1Q969V5 352 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 SLC25A44Q96H78 314 aaPredicted RBP11.69□□□□□ -0.54
HMGN1-211ENST00000471260 SORCS2Q96PQ0 1159 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 PRSS27Q9BQR3 290 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 RAB1BQ9H0U4 201 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 GLTPQ9NZD2 209 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 SH3GLB1Q9Y371 365 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 SPEF1Q9Y4P9 236 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 V9GYQ6 96 aa11.69□□□□□ -0.54
HMGN1-211ENST00000471260 CHD3Q12873 2000 aaKnown RBP11.69□□□□□ -0.54
HMGN1-211ENST00000471260 LOC390937A0A1W2PQ73 354 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 HTR3EA5X5Y0 456 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 ZNF503-AS2A6NEH8 195 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 A8MV72 311 aaPredicted RBP11.68□□□□□ -0.54
HMGN1-211ENST00000471260 CENPBD1B2RD01 187 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 SLC1A7O00341 560 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 RNF13O43567 381 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 UBL3O95164 117 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 OR5F1O95221 314 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 BCL10O95999 233 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 SERPINA1P01009 418 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 MT-ND1P03886 318 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 CELA3BP08861 270 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 CD79AP11912 226 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 ZNF12P17014 697 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 ZNF14P17017 642 aaPredicted RBP11.68□□□□□ -0.54
HMGN1-211ENST00000471260 NPR2P20594 1047 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 USF1P22415 310 aaPredicted RBP11.68□□□□□ -0.54
HMGN1-211ENST00000471260 NR4A1P22736 598 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 EEF1B2P24534 225 aaKnown RBP11.68□□□□□ -0.54
HMGN1-211ENST00000471260 EVX1P49640 407 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 TAS2R41P59536 307 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 CSNK2BP67870 215 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 TEKQ02763 1124 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 NPRL3Q12980 569 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 MOGQ16653 247 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 NRN1LQ496H8 165 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 VHLLQ6RSH7 139 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 HDDC2Q7Z4H3 204 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 DPPA2Q7Z7J5 298 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 TSPYL5Q86VY4 417 aaPredicted RBP11.68□□□□□ -0.54
HMGN1-211ENST00000471260 ZDHHC21Q8IVQ6 265 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 SVOPQ8N4V2 548 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 NEU4Q8WWR8 484 aaPredicted RBP11.68□□□□□ -0.54
HMGN1-211ENST00000471260 LIPHQ8WWY8 451 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 ZNF75AQ96N20 296 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 VRK1Q99986 396 aaPredicted RBP11.68□□□□□ -0.54
HMGN1-211ENST00000471260 APOL4Q9BPW4 351 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 PIMREGQ9BSJ6 248 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 SEC61A2Q9H9S3 476 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 IL1RAPQ9NPH3 570 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 YAE1D1Q9NRH1 226 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 TMEM160Q9NX00 188 aa11.68□□□□□ -0.54
HMGN1-211ENST00000471260 LOC100130705A0A1B0GUX0 176 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 A0A1B0GVG6 124 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 VWC2LB2RUY7 222 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 hCG_2039718K7EN88 272 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 GPRIN2O60269 458 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 SERPINI2O75830 405 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 RAB36O95755 333 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 HLA-HP01893 362 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 B4GALT1P15291 398 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 IGFBP5P24593 272 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 IFNA8P32881 189 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 KDELR2P33947 212 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 THBS4P35443 961 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 RAB1AP62820 205 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 LSM11P83369 360 aaKnown RBP eCLIP11.67□□□□□ -0.54
HMGN1-211ENST00000471260 GPR107Q5VW38 600 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 XAF1Q6GPH4 301 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 OR2T5Q6IEZ7 315 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 NANOGNBQ7Z5D8 188 aa11.67□□□□□ -0.54
HMGN1-211ENST00000471260 MYPOPQ86VE0 399 aaPredicted RBP11.67□□□□□ -0.54
HMGN1-211ENST00000471260 LRRC17Q8N6Y2 441 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 254.3 ms