RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 NUDT6P53370 316 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 RIPPLY3P57055 190 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 CLRN1P58418 232 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 HSF2Q03933 536 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 GLO1Q04760 184 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 GGTLC2Q14390 218 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 SLC17A1Q14916 467 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 TBCEQ15813 527 aaPredicted RBP5.89□□□□□ -1.47
VAMP3-202ENST00000470357 SMN1Q16637 294 aaKnown RBP5.89□□□□□ -1.47
VAMP3-202ENST00000470357 KLHL12Q53G59 568 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 MESTQ5EB52 335 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 ZNF362Q5T0B9 420 aaPredicted RBP5.89□□□□□ -1.47
VAMP3-202ENST00000470357 THEM4Q5T1C6 240 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 EEF1A1P5Q5VTE0 462 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 ABLIM2Q6H8Q1 611 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 FCRLAQ7L513 359 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 MCEMP1Q8IX19 187 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 GHDCQ8N2G8 530 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 ACBD7Q8N6N7 88 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 PROKR2Q8NFJ6 384 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 OR9K2Q8NGE7 335 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 ZPLD1Q8TCW7 415 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 HAVCR2Q8TDQ0 301 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 GGHQ92820 318 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 PTP4A1Q93096 173 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 PPP1R14AQ96A00 147 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 RNFT2Q96EX2 444 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 SLC25A44Q96H78 314 aaPredicted RBP5.89□□□□□ -1.47
VAMP3-202ENST00000470357 TMEM80Q96HE8 168 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 NMNAT3Q96T66 252 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 TEAD3Q99594 435 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 TIMP4Q99727 224 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 TUBA1CQ9BQE3 449 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 JAM3Q9BX67 310 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 CDCA4Q9BXL8 241 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 PRRG4Q9BZD6 226 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 NMNAT2Q9BZQ4 307 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 DEFB127Q9H1M4 99 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 OR51V1Q9H2C8 321 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 B3GAT2Q9NPZ5 323 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 RPRD1BQ9NQG5 326 aaKnown RBP5.89□□□□□ -1.47
VAMP3-202ENST00000470357 GLRX2Q9NS18 164 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 PARPBPQ9NWS1 579 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 ASB6Q9NWX5 421 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 VSX1Q9NZR4 365 aaPredicted RBP5.89□□□□□ -1.47
VAMP3-202ENST00000470357 B3GAT1Q9P2W7 334 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 DIMT1Q9UNQ2 313 aaKnown RBP5.89□□□□□ -1.47
VAMP3-202ENST00000470357 ERGIC3Q9Y282 383 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 TP53TG5Q9Y2B4 290 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 CSAG2Q9Y5P2 127 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 TMEM14AQ9Y6G1 99 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 MED12LQ86YW9 2145 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 SHANK1Q9Y566 2161 aa5.89□□□□□ -1.47
VAMP3-202ENST00000470357 SLC22A23A1A5C7 686 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 A1L4Q6 167 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 OR6C68A6NDL8 312 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 SLC22A20A6NK97 555 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 FAM183AA6NL82 134 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 ZNF724A8MTY0 619 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 AHRRA9YTQ3 701 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 PHYHO14832 338 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 SMAD9O15198 467 aaKnown RBP5.88□□□□□ -1.47
VAMP3-202ENST00000470357 TMCC2O75069 709 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 SLC43A1O75387 559 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 KHDRBS3O75525 346 aaKnown RBP5.88□□□□□ -1.47
VAMP3-202ENST00000470357 TRMUO75648 421 aaKnown RBP5.88□□□□□ -1.47
VAMP3-202ENST00000470357 PLGP00747 810 aaPredicted RBP5.88□□□□□ -1.47
VAMP3-202ENST00000470357 OR2T7P0C7T2 308 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 SMIM18P0DKX4 95 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 GABRA1P14867 456 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 CDKN2AP42771 156 aaKnown RBP5.88□□□□□ -1.47
VAMP3-202ENST00000470357 GUCA1AP43080 201 aaPredicted RBP5.88□□□□□ -1.47
VAMP3-202ENST00000470357 SUCLG1P53597 346 aaKnown RBP5.88□□□□□ -1.47
VAMP3-202ENST00000470357 BIDP55957 195 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 CLDN17P56750 224 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 PMP22Q01453 160 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 SRYQ05066 204 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 RASGEF1BQ0VAM2 473 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 ESPL1Q14674 2120 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 STK11Q15831 433 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 EIF2S3LQ2VIR3 472 aaKnown RBP5.88□□□□□ -1.47
VAMP3-202ENST00000470357 PLEKHN1Q494U1 663 aaPredicted RBP5.88□□□□□ -1.47
VAMP3-202ENST00000470357 OR2A2Q6IF42 318 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 NHLRC1Q6VVB1 395 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 TMPRSS11AQ6ZMR5 421 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 CREB3L2Q70SY1 520 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 ZBTB46Q86UZ6 589 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 SIAH3Q8IW03 269 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 SPARTQ8N0X7 666 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 TEX19Q8NA77 164 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 CYB561A3Q8NBI2 242 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 BVESQ8NE79 360 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 NOXO1Q8NFA2 376 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 OR6K6Q8NGW6 343 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 OR6N1Q8NGY5 312 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 OR2T27Q8NH04 317 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 RNF128Q8TEB7 428 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 RORBQ92753 470 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 TMEM45BQ96B21 275 aa5.88□□□□□ -1.47
VAMP3-202ENST00000470357 DNAJA3Q96EY1 480 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms