RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 IGHV3-13P01766 116 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 LCKP06239 509 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 STOMP27105 288 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 APLNRP35414 380 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 WNT5AP41221 380 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 DVL1P1P54792 670 aaPredicted RBP13.92□□□□□ -0.18
COL9A3-208ENST00000469802 TMEM33P57088 247 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 SELENOVP59797 346 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 CTXN1P60606 82 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 PSG4Q00888 419 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 ALKBH6Q3KRA9 238 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 TMEM255AQ5JRV8 349 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 MBOAT2Q6ZWT7 520 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 MEX3DQ86XN8 651 aaKnown RBP13.92□□□□□ -0.18
COL9A3-208ENST00000469802 RNF113BQ8IZP6 322 aaKnown RBP13.92□□□□□ -0.18
COL9A3-208ENST00000469802 OR13C2Q8NGS9 318 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 CLDND2Q8NHS1 167 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 C11orf40Q8WZ69 217 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 REPIN1Q9BWE0 567 aaKnown RBP13.92□□□□□ -0.18
COL9A3-208ENST00000469802 ZNF416Q9BWM5 594 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 GPR160Q9UJ42 338 aa13.92□□□□□ -0.18
COL9A3-208ENST00000469802 A6NIZ1 184 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 EFCAB9A8MZ26 197 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 CDC42EP2O14613 210 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 WNT9BO14905 357 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 ZNF682O95780 498 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 TFP02787 698 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 CST2P09228 141 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 RAP1BP61224 184 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 RAP1AP62834 184 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 ERVK-25P63136 954 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 SGCAQ16586 387 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 PCGF3Q3KNV8 242 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 HSP90B2PQ58FF3 399 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 TMPRSS11FQ6ZWK6 438 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 OAFQ86UD1 273 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 OR1J1Q8NGS3 322 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 OR51A7Q8NH64 312 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 AKR7LQ8NHP1 331 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 SNX33Q8WV41 574 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 OR2H1Q9GZK4 316 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 WNT5BQ9H1J7 359 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 KCNN2Q9H2S1 579 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 ANKRD19PQ9H560 264 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 EFCAB1Q9HAE3 211 aa13.91□□□□□ -0.18
COL9A3-208ENST00000469802 TMEFF2Q9UIK5 374 aaPredicted RBP13.91□□□□□ -0.18
COL9A3-208ENST00000469802 B4DSR2 109 aa13.9□□□□□ -0.18
COL9A3-208ENST00000469802 FAM157AC9JC47 383 aa13.9□□□□□ -0.18
COL9A3-208ENST00000469802 SERPINA1P01009 418 aa13.9□□□□□ -0.18
COL9A3-208ENST00000469802 ZNF26P17031 533 aaPredicted RBP13.9□□□□□ -0.18
COL9A3-208ENST00000469802 LAP3P28838 519 aa13.9□□□□□ -0.18
COL9A3-208ENST00000469802 GPR4P46093 362 aa13.9□□□□□ -0.18
COL9A3-208ENST00000469802 NUDT2P50583 147 aa13.9□□□□□ -0.18
COL9A3-208ENST00000469802 CCL8P80075 99 aa13.9□□□□□ -0.18
COL9A3-208ENST00000469802 ENDOGQ14249 297 aaKnown RBP13.9□□□□□ -0.18
COL9A3-208ENST00000469802 TMEM154Q6P9G4 183 aa13.9□□□□□ -0.18
COL9A3-208ENST00000469802 ZNF730Q6ZMV8 503 aa13.9□□□□□ -0.18
COL9A3-208ENST00000469802 RFPL4BQ6ZWI9 263 aa13.9□□□□□ -0.18
COL9A3-208ENST00000469802 FAM122BQ7Z309 247 aa13.9□□□□□ -0.18
COL9A3-208ENST00000469802 SLC7A13Q8TCU3 470 aa13.9□□□□□ -0.18
COL9A3-208ENST00000469802 GTF3AQ92664 365 aaKnown RBP13.9□□□□□ -0.18
COL9A3-208ENST00000469802 MARS2Q96GW9 593 aaKnown RBP13.9□□□□□ -0.18
COL9A3-208ENST00000469802 RBP7Q96R05 134 aa13.9□□□□□ -0.18
COL9A3-208ENST00000469802 MYLK2Q9H1R3 596 aa13.9□□□□□ -0.18
COL9A3-208ENST00000469802 ENPP4Q9Y6X5 453 aa13.9□□□□□ -0.18
COL9A3-208ENST00000469802 C5orf49A4QMS7 147 aa13.89□□□□□ -0.19
COL9A3-208ENST00000469802 NDUFAB1O14561 156 aa13.89□□□□□ -0.19
COL9A3-208ENST00000469802 CD14P08571 375 aa13.89□□□□□ -0.19
COL9A3-208ENST00000469802 MSR1P21757 451 aa13.89□□□□□ -0.19
COL9A3-208ENST00000469802 MPV17P39210 176 aa13.89□□□□□ -0.19
COL9A3-208ENST00000469802 CRYBB2P43320 205 aa13.89□□□□□ -0.19
COL9A3-208ENST00000469802 GDI2P50395 445 aaKnown RBP13.89□□□□□ -0.19
COL9A3-208ENST00000469802 LMO4P61968 165 aa13.89□□□□□ -0.19
COL9A3-208ENST00000469802 MESTQ5EB52 335 aa13.89□□□□□ -0.19
COL9A3-208ENST00000469802 MBNL2Q5VZF2 373 aaKnown RBP13.89□□□□□ -0.19
COL9A3-208ENST00000469802 TBPL2Q6SJ96 375 aa13.89□□□□□ -0.19
COL9A3-208ENST00000469802 SYT9Q86SS6 491 aa13.89□□□□□ -0.19
COL9A3-208ENST00000469802 ICA1LQ8NDH6 482 aa13.89□□□□□ -0.19
COL9A3-208ENST00000469802 IPCEF1Q8WWN9 437 aaPredicted RBP13.89□□□□□ -0.19
COL9A3-208ENST00000469802 NARFLQ9H6Q4 476 aa13.89□□□□□ -0.19
COL9A3-208ENST00000469802 NMNAT1Q9HAN9 279 aaPredicted RBP13.89□□□□□ -0.19
COL9A3-208ENST00000469802 POLE4Q9NR33 117 aa13.89□□□□□ -0.19
COL9A3-208ENST00000469802 ADAM18Q9Y3Q7 739 aa13.89□□□□□ -0.19
COL9A3-208ENST00000469802 A0A1W2PPL8 197 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 A0A1W2PRQ8 180 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 H3BSA7 217 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 H7C1C5 153 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 GSTA4O15217 222 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 PPIHO43447 177 aaKnown RBP13.88□□□□□ -0.19
COL9A3-208ENST00000469802 SCG5P05408 212 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 ADH4P08319 380 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 GAAP10253 952 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 NCK1P16333 377 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 PCMT1P22061 227 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 CCNOP22674 350 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 LIMS1P48059 325 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 MMP15P51511 669 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 PCBD1P61457 104 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 LCN6P62502 163 aa13.88□□□□□ -0.19
COL9A3-208ENST00000469802 GLO1Q04760 184 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms