RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 CD180Q99467 661 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 KLHL28Q9NXS3 571 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 HAO2Q9NYQ3 351 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 FBXL4Q9UKA2 621 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 ATXN7L1Q9ULK2 861 aaPredicted RBP12.57□□□□□ -0.4
GPC1-208ENST00000469694 LHX6Q9UPM6 363 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 NCOR1O75376 2440 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 C19orf67A6NJJ6 358 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 TMEM200CA6NKL6 621 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 BCL2L11O43521 198 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 NPBWR1P48145 328 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 HCCSP53701 268 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 PSG6Q00889 435 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 ECH1Q13011 328 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 ZNF345Q14585 488 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 LY6G6FQ5SQ64 297 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 C3orf33Q6P1S2 294 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 CORO6Q6QEF8 472 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 GLB1L2Q8IW92 636 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 SLC2A12Q8TD20 617 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 PHYHIPQ92561 330 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 ELF4Q99607 663 aaPredicted RBP12.57□□□□□ -0.4
GPC1-208ENST00000469694 PDCD1LG2Q9BQ51 273 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 MTHFD2LQ9H903 347 aaPredicted RBP12.57□□□□□ -0.4
GPC1-208ENST00000469694 KRCC1Q9NPI7 259 aaPredicted RBP12.57□□□□□ -0.4
GPC1-208ENST00000469694 PRTFDC1Q9NRG1 225 aa12.57□□□□□ -0.4
GPC1-208ENST00000469694 TRBV2A0A0J9YWF9 115 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 OR14I1A6ND48 311 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 OR2F2O95006 317 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 NSA2O95478 260 aaKnown RBP12.56□□□□□ -0.4
GPC1-208ENST00000469694 SPI1P17947 270 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 ARL4DP49703 201 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 OR2F1Q13607 317 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 PCGF3Q3KNV8 242 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 LYSMD4Q5XG99 296 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 SLC6A19Q695T7 634 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 KRT77Q7Z794 578 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 CDRT4Q8N9R6 151 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 ZNF471Q9BX82 626 aaPredicted RBP12.56□□□□□ -0.4
GPC1-208ENST00000469694 CHST6Q9GZX3 395 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 ZNF350Q9GZX5 532 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 SLC25A18Q9H1K4 315 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 C14orf105Q9NVL8 296 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 CALML5Q9NZT1 146 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 V9GY05 133 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 A0A087WV62 115 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 H7C417 338 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 NUDT21O43809 227 aaKnown RBP12.56□□□□□ -0.4
GPC1-208ENST00000469694 TMEM127O75204 238 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 RBBP9O75884 186 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 F12P00748 615 aaPredicted RBP12.56□□□□□ -0.4
GPC1-208ENST00000469694 MAKP20794 623 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 S100PP25815 95 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 HTR2AP28223 471 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 PRKAR1BP31321 381 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 EMDP50402 254 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 C4orf46Q504U0 113 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 C1orf189Q5VU69 101 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 THSD4Q6ZMP0 1018 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 PFN4Q8NHR9 129 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 MIB2Q96AX9 1013 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 ASF1BQ9NVP2 202 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 MTFP1Q9UDX5 166 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 MIOXQ9UGB7 285 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 ZNF230Q9UIE0 474 aaPredicted RBP12.56□□□□□ -0.4
GPC1-208ENST00000469694 TNFSF18Q9UNG2 199 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 SLC35A3Q9Y2D2 325 aa12.56□□□□□ -0.4
GPC1-208ENST00000469694 CPED1A4D0V7 1026 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 C5orf52A6NGY3 159 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 CTNSO60931 367 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 IGKV1D-16P01601 117 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 CD8AP01732 235 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 CD1AP06126 327 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 PLAURQ03405 335 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 FAM53BQ14153 422 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 HABP2Q14520 560 aaPredicted RBP12.55□□□□□ -0.4
GPC1-208ENST00000469694 MRPL2Q5T653 305 aaKnown RBP12.55□□□□□ -0.4
GPC1-208ENST00000469694 RPL22L1Q6P5R6 122 aaKnown RBP12.55□□□□□ -0.4
GPC1-208ENST00000469694 TMEM71Q6P5X7 295 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 BEST3Q8N1M1 668 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 ZNF321PQ8N8H1 164 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 RCBTB1Q8NDN9 531 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 OR1L3Q8NH93 324 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 DUSP19Q8WTR2 217 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 EDARADDQ8WWZ3 215 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 ZNF285Q96NJ3 590 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 LMF1Q96S06 567 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 VRK1Q99986 396 aaPredicted RBP12.55□□□□□ -0.4
GPC1-208ENST00000469694 MRI1Q9BV20 369 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 APMAPQ9HDC9 416 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 C20orf141Q9NUB4 165 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 ALPK2Q86TB3 2170 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 OR5H14A6NHG9 310 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 ACTL6AO96019 429 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 IGHV2-70P01814 119 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 GYPBP06028 91 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 CALCBP10092 127 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 GLB1P16278 677 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 CRMP1Q14194 572 aa12.55□□□□□ -0.4
GPC1-208ENST00000469694 GLT8D1Q68CQ7 371 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms