RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 CA7P43166 264 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 CDH15P55291 814 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 SH3BGRP55822 239 aaPredicted RBP7.18□□□□□ -1.26
NPHP3-204ENST00000469232 ACTC1P68032 377 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 ACTA1P68133 377 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 ROM1Q03395 351 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 EMX1Q04741 257 aaPredicted RBP7.18□□□□□ -1.26
NPHP3-204ENST00000469232 RBPJQ06330 500 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 ACSM1Q08AH1 577 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 DBPQ10586 325 aaPredicted RBP7.18□□□□□ -1.26
NPHP3-204ENST00000469232 BLMHQ13867 455 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 KLHL12Q53G59 568 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 C1QTNF12Q5T7M4 302 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 FAM27BQ5VT28 67 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 UBE2UQ5VVX9 321 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 FBXW9Q5XUX1 488 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 ZNF585AQ6P3V2 769 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 MCEMP1Q8IX19 187 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 NANOGP1Q8N7R0 232 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 OR4F15Q8NGB8 312 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 OR52N1Q8NH53 320 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 OTOSQ8NHW6 89 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 RPS4Y2Q8TD47 263 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 STARD4Q96DR4 205 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 VKORC1Q9BQB6 163 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 SFXN3Q9BWM7 321 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 MRPS26Q9BYN8 205 aaKnown RBP7.18□□□□□ -1.26
NPHP3-204ENST00000469232 TMEM38BQ9NVV0 291 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 ERVK13-1Q9NX77 482 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 JKAMPQ9P055 326 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 CYB5R1Q9UHQ9 305 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 FREM1Q5H8C1 2179 aa7.18□□□□□ -1.26
NPHP3-204ENST00000469232 ZGRF1Q86YA3 2104 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 A6NJY4 79 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 PTGES3LE9PB15 166 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 SELENOFO60613 162 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 SMNDC1O75940 238 aaKnown RBP eCLIP7.17□□□□□ -1.26
NPHP3-204ENST00000469232 RPSAP08865 295 aaKnown RBP7.17□□□□□ -1.26
NPHP3-204ENST00000469232 PSKH1P11801 424 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 NPR2P20594 1047 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 GSK3AP49840 483 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 ENTPD1P49961 510 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 ETV1P50549 477 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 ZNF85Q03923 595 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 FOXF2Q12947 444 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 ENDOGQ14249 297 aaKnown RBP7.17□□□□□ -1.26
NPHP3-204ENST00000469232 GALEQ14376 348 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 SYT6Q5T7P8 510 aaPredicted RBP7.17□□□□□ -1.26
NPHP3-204ENST00000469232 B3GLCTQ6Y288 498 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 Q6ZT83 130 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 SHFQ7M4L6 423 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 P4HA3Q7Z4N8 544 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 SYT9Q86SS6 491 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 ATCAYQ86WG3 371 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 ZNF295-AS1Q8N0V1 137 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 GABRG1Q8N1C3 465 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 SYS1Q8N2H4 156 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 GPR137CQ8N3F9 429 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 RPRMLQ8N4K4 120 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 NAXEQ8NCW5 288 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 OR51L1Q8NGJ5 315 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 OR51G2Q8NGK0 314 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 OR6N1Q8NGY5 312 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 ST7LQ8TDW4 575 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 C11orf40Q8WZ69 217 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 MUL1Q969V5 352 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 APH1AQ96BI3 265 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 INTS14Q96SY0 518 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 ULBP2Q9BZM5 246 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 NELFAQ9H3P2 528 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 WDR76Q9H967 626 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 SIAEQ9HAT2 523 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 ISYNA1Q9NPH2 558 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 ACOT13Q9NPJ3 140 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 B3GAT2Q9NPZ5 323 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 ZNF629Q9UEG4 869 aaPredicted RBP7.17□□□□□ -1.26
NPHP3-204ENST00000469232 CLEC4AQ9UMR7 237 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 CAB39Q9Y376 341 aaPredicted RBP7.17□□□□□ -1.26
NPHP3-204ENST00000469232 EMC9Q9Y3B6 208 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 TMEM14AQ9Y6G1 99 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 CACNA1BQ00975 2339 aa7.17□□□□□ -1.26
NPHP3-204ENST00000469232 NCOA6Q14686 2063 aaPredicted RBP7.16□□□□□ -1.26
NPHP3-204ENST00000469232 HSPB2A8KAH6 182 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 C12orf71A8MTZ7 269 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 ZNF99A8MXY4 864 aaPredicted RBP7.16□□□□□ -1.26
NPHP3-204ENST00000469232 ABHD16AO95870 558 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 CST2P09228 141 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 MSR1P21757 451 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 CTSSP25774 331 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 MPGP29372 298 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 DCTDP32321 178 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 OPRM1P35372 400 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 CAPZA2P47755 286 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 NR1H2P55055 460 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 BDH1Q02338 343 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 PIGFQ07326 219 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 DOC2BQ14184 412 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 HSPB2Q16082 182 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 CDONQ4KMG0 1287 aa7.16□□□□□ -1.26
NPHP3-204ENST00000469232 CARD17Q5XLA6 110 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms