RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 IGLV1-36A0A0B4J1U3 117 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 MPZL1O95297 269 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 RAB36O95755 333 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 ALPLP05186 524 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 CELA3BP08861 270 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 CST2P09228 141 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 MMP7P09237 267 aaPredicted RBP10.39□□□□□ -0.75
VPS13D-204ENST00000469054 CECR9P0C854 216 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 CENPAP49450 140 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 SLC25A1P53007 311 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 GLO1Q04760 184 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 DAG1Q14118 895 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 ENDOGQ14249 297 aaKnown RBP10.39□□□□□ -0.75
VPS13D-204ENST00000469054 PTGES3Q15185 160 aaKnown RBP10.39□□□□□ -0.75
VPS13D-204ENST00000469054 ADAM5Q6NVV9 412 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 TMEM53Q6P2H8 277 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 UGT2A3Q6UWM9 527 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 DEPDC4Q8N2C3 294 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 IL17RDQ8NFM7 739 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 OR2T4Q8NH00 348 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 C11orf40Q8WZ69 217 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 FBXO17Q96EF6 278 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 LURAP1Q96LR2 239 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 FOXN4Q96NZ1 517 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 C9orf16Q9BUW7 83 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 ZNF416Q9BWM5 594 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 NMNAT2Q9BZQ4 307 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 CCNB1IP1Q9NPC3 277 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 USE1Q9NZ43 259 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 FBXL3Q9UKT7 428 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 PRR14LQ5THK1 2151 aa10.39□□□□□ -0.75
VPS13D-204ENST00000469054 FAM171A2A8MVW0 826 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 SHISA9B4DS77 424 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 EI24O14681 340 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 SURF4O15260 269 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 GPANK1O95872 356 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 CRYAAP02489 173 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 SERPINA5P05154 406 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 GAAP10253 952 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 ANPEPP15144 967 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 ZNF14P17017 642 aaPredicted RBP10.38□□□□□ -0.75
VPS13D-204ENST00000469054 ZNF32P17041 273 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 EPHA2P29317 976 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 PYCR1P32322 319 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 ALDH3A2P51648 485 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 PCBD1P61457 104 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 LSM6P62312 80 aaKnown RBP10.38□□□□□ -0.75
VPS13D-204ENST00000469054 ELF3P78545 371 aaPredicted RBP10.38□□□□□ -0.75
VPS13D-204ENST00000469054 NAAAQ02083 359 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 HSF2Q03933 536 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 SPOCK1Q08629 439 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 DBPQ10586 325 aaPredicted RBP10.38□□□□□ -0.75
VPS13D-204ENST00000469054 RAB39AQ14964 217 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 RCN1Q15293 331 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 SNAPC1Q16533 368 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 KCNMB1Q16558 191 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 SLC22A25Q6T423 547 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 ZBTB49Q6ZSB9 765 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 SYT9Q86SS6 491 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 MYPOPQ86VE0 399 aaPredicted RBP10.38□□□□□ -0.75
VPS13D-204ENST00000469054 CBR4Q8N4T8 237 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 PROKR2Q8NFJ6 384 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 KBTBD8Q8NFY9 601 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 OR9Q1Q8NGQ5 310 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 AKAP1Q92667 903 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS13D-204ENST00000469054 PTP4A1Q93096 173 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 EME1Q96AY2 570 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 KCNS3Q9BQ31 491 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 WACQ9BTA9 647 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 EMC7Q9NPA0 242 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 TVP23BQ9NYZ1 205 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 TIMM10BQ9Y5J6 103 aa10.38□□□□□ -0.75
VPS13D-204ENST00000469054 UTP20O75691 2785 aaKnown RBP10.38□□□□□ -0.75
VPS13D-204ENST00000469054 ZAR1LA6NP61 321 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 CYSRT1A8MQ03 144 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 C12orf71A8MTZ7 269 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 PTHP01270 115 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 HLA-DQA2P01906 255 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 TFP02787 698 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 SPI1P17947 270 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 PAICSP22234 425 aaKnown RBP10.37□□□□□ -0.75
VPS13D-204ENST00000469054 CALCRP30988 508 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 POLR2IP36954 125 aaKnown RBP10.37□□□□□ -0.75
VPS13D-204ENST00000469054 PSG4Q00888 419 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 TEKQ02763 1124 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 PLP2Q04941 152 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 MEP1BQ16820 701 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 ZNF672Q499Z4 452 aaPredicted RBP10.37□□□□□ -0.75
VPS13D-204ENST00000469054 PABPC1L2AQ5JQF8 200 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 SLX4IPQ5VYV7 408 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 OTPQ5XKR4 325 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 ZNF584Q8IVC4 421 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 SLC26A10Q8NG04 563 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 OR51L1Q8NGJ5 315 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 LILRB1Q8NHL6 650 aaPredicted RBP10.37□□□□□ -0.75
VPS13D-204ENST00000469054 ZNRF4Q8WWF5 429 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 NRGNQ92686 78 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 NEUROG1Q92886 237 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 PLEKHA8Q96JA3 519 aa10.37□□□□□ -0.75
VPS13D-204ENST00000469054 SLC29A1Q99808 456 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms