RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 RHOXF1Q8NHV9 184 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 RNFT2Q96EX2 444 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 FOXN4Q96NZ1 517 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 HDHD5Q9BXW7 423 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 RNF121Q9H920 327 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 KCNJ16Q9NPI9 418 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 TMEM38BQ9NVV0 291 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 CHCHD3Q9NX63 227 aaKnown RBP7.15□□□□□ -1.26
HDAC6-216ENST00000468949 ELOVL5Q9NYP7 299 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF226Q9NYT6 803 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 KCNG2Q9UJ96 466 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 B9D1Q9UPM9 204 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 LRCH1Q9Y2L9 728 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 TPRKBQ9Y3C4 175 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 PCDHGB1Q9Y5G3 927 aa7.15□□□□□ -1.26
HDAC6-216ENST00000468949 COL12A1Q99715 3063 aa7.15□□□□□ -1.27
HDAC6-216ENST00000468949 A0A096LPE4 126 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 IGLV1-36A0A0B4J1U3 117 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 A0A1W2PPZ6 126 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 EFCAB10A6NFE3 127 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 TVP23AA6NH52 213 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF670-ZNF695F2Z2N8 137 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 RPL36A-HNRNPH2H7BZ11 118 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 DENRO43583 198 aaKnown RBP7.14□□□□□ -1.27
HDAC6-216ENST00000468949 ZG16O60844 167 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 UBL3O95164 117 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 CLDN14O95500 239 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 RAB36O95755 333 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 FADS2O95864 444 aaKnown RBP7.14□□□□□ -1.27
HDAC6-216ENST00000468949 WNT11O96014 354 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 CGAP01215 116 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 ITGA5P08648 1049 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 CD79AP11912 226 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 MYL12AP19105 171 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 COX5AP20674 150 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 AGAP20933 346 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 IGHV1-2P23083 117 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 EDNRAP25101 427 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 CDAP32320 146 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 NTF4P34130 210 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 CD79BP40259 229 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 ENTPD1P49961 510 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 ISL1P61371 349 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 ACTC1P68032 377 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 ACTA1P68133 377 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 MRPS34P82930 218 aaKnown RBP7.14□□□□□ -1.27
HDAC6-216ENST00000468949 HSF2Q03933 536 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF91Q05481 1191 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 SCRN3Q0VDG4 424 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 CDK5R2Q13319 367 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 ETFDHQ16134 617 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 NRN1LQ496H8 165 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 KLHL22Q53GT1 634 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 RBM48Q5RL73 367 aaKnown RBP7.14□□□□□ -1.27
HDAC6-216ENST00000468949 PHYHD1Q5SRE7 291 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 SLC25A30Q5SVS4 291 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 AADACL4Q5VUY2 407 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 ALKBH2Q6NS38 261 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 TMEM53Q6P2H8 277 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 LRFN4Q6PJG9 635 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 NHLRC1Q6VVB1 395 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 SHFQ7M4L6 423 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 DPPA2Q7Z7J5 298 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 WDFY1Q8IWB7 410 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 CCDC36Q8IYA8 594 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 LRRC18Q8N456 261 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 STX19Q8N4C7 294 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 C17orf78Q8N4C9 275 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 SLC22A24Q8N4F4 322 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 ZNF540Q8NDQ6 660 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 OR10H4Q8NGA5 316 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 OR1K1Q8NGR3 316 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 UBE2FQ969M7 185 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 MUCL1Q96DR8 90 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 HCAR1Q9BXC0 346 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 NMNAT2Q9BZQ4 307 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 SIAEQ9HAT2 523 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 MOV10Q9HCE1 1003 aaKnown RBP7.14□□□□□ -1.27
HDAC6-216ENST00000468949 POLE4Q9NR33 117 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 LAMP5Q9UJQ1 280 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 AMDHD2Q9Y303 409 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 TMEM14AQ9Y6G1 99 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 COMMD3-BMI1R4GMX3 469 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 RELNP78509 3460 aa7.14□□□□□ -1.27
HDAC6-216ENST00000468949 DOPEY1Q5JWR5 2465 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 HIVEP3Q5T1R4 2406 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 USP9YO00507 2555 aaPredicted RBP7.13□□□□□ -1.27
HDAC6-216ENST00000468949 IGKV1D-43A0A0B4J1Z2 117 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 NKX2-6A6NCS4 301 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 CCDC182A6NF36 153 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 A8MXE2 369 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 E9PQ18 207 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 C16orf97H3BN30 126 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 SLC1A7O00341 560 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 DCTN6O00399 190 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 PHYHO14832 338 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 SELENOFO60613 162 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 APOL3O95236 402 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 HRGP04196 525 aa7.13□□□□□ -1.27
HDAC6-216ENST00000468949 DBTP11182 482 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms