RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 TMEM5Q9Y2B1 443 aa16.39■□□□□ 0.21
COL7A1-207ENST00000467985 FAM32AQ9Y421 112 aaKnown RBP16.39■□□□□ 0.21
COL7A1-207ENST00000467985 ENPP4Q9Y6X5 453 aa16.39■□□□□ 0.21
COL7A1-207ENST00000467985 TRAV27A0A087WT01 109 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 A0A087WUU8 490 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 ERICH4A6NGS2 130 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 PRSS23O95084 383 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 TACSTD2P09758 323 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 ZNF250P15622 560 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 CDAP32320 146 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 ALDH3B1P43353 468 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 UCP2P55851 309 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 KLF3P57682 345 aaPredicted RBP16.38■□□□□ 0.21
COL7A1-207ENST00000467985 FMODQ06828 376 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 RIN1Q13671 783 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 SGCAQ16586 387 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 MOGQ16653 247 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 PABPC1L2AQ5JQF8 200 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 FAM27BQ5VT28 67 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 UGT2A3Q6UWM9 527 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 UNQ6126/PRO20091Q6UXV3 157 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 TMPRSS11FQ6ZWK6 438 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 LRP11Q86VZ4 500 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 PAQR4Q8N4S7 273 aaPredicted RBP16.38■□□□□ 0.21
COL7A1-207ENST00000467985 SYNPRQ8TBG9 265 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 NSMAFQ92636 917 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 NABP1Q96AH0 204 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 MSI2Q96DH6 328 aaKnown RBP16.38■□□□□ 0.21
COL7A1-207ENST00000467985 SHARPINQ9H0F6 387 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 SLCO1C1Q9NYB5 712 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 FZR1Q9UM11 496 aa16.38■□□□□ 0.21
COL7A1-207ENST00000467985 SAMD4AQ9UPU9 718 aaKnown RBP16.38■□□□□ 0.21
COL7A1-207ENST00000467985 LCKP06239 509 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 FAM157BP0CG42 384 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 CCL2P13500 99 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 HSD17B1P14061 328 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 APEX1P27695 318 aaKnown RBP16.37■□□□□ 0.21
COL7A1-207ENST00000467985 PCBD1P61457 104 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 MRPS11P82912 194 aaKnown RBP16.37■□□□□ 0.21
COL7A1-207ENST00000467985 FHL1Q13642 323 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 NKPD1Q17RQ9 610 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 IGFN1Q86VF2 1251 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 C1orf174Q8IYL3 243 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 ALDH16A1Q8IZ83 802 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 ARIH2OSQ8N7S6 290 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 LRRC75AQ8NAA5 344 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 OR13C2Q8NGS9 318 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 CCDC124Q96CT7 223 aaKnown RBP16.37■□□□□ 0.21
COL7A1-207ENST00000467985 TSPAN32Q96QS1 320 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 MDFIQ99750 246 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 CHODLQ9H9P2 273 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 MYEF2Q9P2K5 600 aaKnown RBP16.37■□□□□ 0.21
COL7A1-207ENST00000467985 EGFL7Q9UHF1 273 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 MALRD1Q5VYJ5 2156 aa16.37■□□□□ 0.21
COL7A1-207ENST00000467985 IGLV3-9A0A075B6K5 115 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 IGKV1D-43A0A0B4J1Z2 117 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 A0A1W2PRQ8 180 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 AHCYL1O43865 530 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 H1F0P07305 194 aaKnown RBP16.36■□□□□ 0.21
COL7A1-207ENST00000467985 CST2P09228 141 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 NCK1P16333 377 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 ZNF32P17041 273 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 HNF1AP20823 631 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 FUT4P22083 530 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 STOMP27105 288 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 RPL4P36578 427 aaKnown RBP16.36■□□□□ 0.21
COL7A1-207ENST00000467985 DGCR6Q14129 220 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 MAD2L1BPQ15013 274 aaPredicted RBP16.36■□□□□ 0.21
COL7A1-207ENST00000467985 ZBED5Q49AG3 693 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 GLYATQ6IB77 296 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 TBPL2Q6SJ96 375 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 SLC7A13Q8TCU3 470 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 SNX33Q8WV41 574 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 RDH5Q92781 318 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 CLPTM1LQ96KA5 538 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 DCAF13Q9NV06 445 aaKnown RBP16.36■□□□□ 0.21
COL7A1-207ENST00000467985 EIF3KQ9UBQ5 218 aaKnown RBP16.36■□□□□ 0.21
COL7A1-207ENST00000467985 GRHPRQ9UBQ7 328 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 MAGEL2Q9UJ55 1249 aa16.36■□□□□ 0.21
COL7A1-207ENST00000467985 XKRYO14609 159 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 GSC2O15499 205 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 LILRA1O75019 489 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 TGFAP01135 160 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 MT-ND5P03915 603 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 CD14P08571 375 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 RHCEP18577 417 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 ACHEP22303 614 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 GPR4P46093 362 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 GDI2P50395 445 aaKnown RBP16.35■□□□□ 0.21
COL7A1-207ENST00000467985 ERVK-25P63136 954 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 PCGF3Q3KNV8 242 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 ELFN2Q5R3F8 820 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 TMEM154Q6P9G4 183 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 FOXL2NBQ6ZUU3 175 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 SYT9Q86SS6 491 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 MEX3DQ86XN8 651 aaKnown RBP16.35■□□□□ 0.21
COL7A1-207ENST00000467985 CPEB3Q8NE35 698 aaKnown RBP16.35■□□□□ 0.21
COL7A1-207ENST00000467985 WACQ9BTA9 647 aa16.35■□□□□ 0.21
COL7A1-207ENST00000467985 CADM1Q9BY67 442 aaKnown RBP16.35■□□□□ 0.21
COL7A1-207ENST00000467985 OR51B6Q9H340 312 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms