RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 ARPC5O15511 151 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 SLC2A1P11166 492 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 CPT2P23786 658 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 ADH6P28332 368 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 SEC61A1P61619 476 aaKnown RBP12.53□□□□□ -0.4
BRAT1-203ENST00000467558 EIF3IQ13347 325 aaKnown RBP12.53□□□□□ -0.4
BRAT1-203ENST00000467558 ZNF141Q15928 474 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 EXOSC6Q5RKV6 272 aaKnown RBP12.53□□□□□ -0.4
BRAT1-203ENST00000467558 ARSKQ6UWY0 536 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 Q7L0L9 218 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 TRAPPC6BQ86SZ2 158 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 OR9K2Q8NGE7 335 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 OR5D18Q8NGL1 313 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 MOB1AQ9H8S9 216 aa12.53□□□□□ -0.4
BRAT1-203ENST00000467558 ZDBF2Q9HCK1 2354 aa12.52□□□□□ -0.4
BRAT1-203ENST00000467558 SULF2Q8IWU5 870 aa12.52□□□□□ -0.4
BRAT1-203ENST00000467558 ZADH2Q8N4Q0 377 aa12.52□□□□□ -0.4
BRAT1-203ENST00000467558 ZNF709Q8N972 641 aa12.52□□□□□ -0.4
BRAT1-203ENST00000467558 SCGB1C1Q8TD33 95 aa12.52□□□□□ -0.4
BRAT1-203ENST00000467558 KCNE4Q8WWG9 221 aa12.52□□□□□ -0.4
BRAT1-203ENST00000467558 EMC7Q9NPA0 242 aa12.52□□□□□ -0.4
BRAT1-203ENST00000467558 UNC13CQ8NB66 2214 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 FAM186AA6NE01 2351 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 LOC107986453A0A1B0GWG9 222 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 CALCBP10092 127 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 GAAP10253 952 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 EMP3P54852 163 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 AQP6Q13520 282 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 DOK3Q7L591 496 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 C10orf111Q8N326 155 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 OBP2BQ9NPH6 170 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 C20orf141Q9NUB4 165 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 REV1Q9UBZ9 1251 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 DICER1Q9UPY3 1922 aaKnown RBP12.52□□□□□ -0.41
BRAT1-203ENST00000467558 EPOPA6NHQ4 379 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 SHISA7A6NL88 538 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 ERGP11308 486 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 BLVRBP30043 206 aaPredicted RBP12.52□□□□□ -0.41
BRAT1-203ENST00000467558 WDR74Q6RFH5 385 aaPredicted RBP12.52□□□□□ -0.41
BRAT1-203ENST00000467558 STX12Q86Y82 276 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 GDF15Q99988 308 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 DUSP15Q9H1R2 295 aaPredicted RBP12.52□□□□□ -0.41
BRAT1-203ENST00000467558 RAB9BQ9NP90 201 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 EHFQ9NZC4 300 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 UTRNP46939 3433 aa12.52□□□□□ -0.41
BRAT1-203ENST00000467558 TRABD2BA6NFA1 517 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 ARGFXA6NJG6 315 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 MAGEB4O15481 346 aaPredicted RBP12.51□□□□□ -0.41
BRAT1-203ENST00000467558 RFPL3O75679 317 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 CHRM2P08172 466 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 RPS27P42677 84 aaKnown RBP12.51□□□□□ -0.41
BRAT1-203ENST00000467558 ZNF117Q03924 483 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 TNK1Q13470 666 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 CTF1Q16619 201 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 XAF1Q6GPH4 301 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 Q6ZTK2 550 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 GPR155Q7Z3F1 870 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 KTI12Q96EK9 354 aaPredicted RBP12.51□□□□□ -0.41
BRAT1-203ENST00000467558 TAS2R3Q9NYW6 316 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 B9D1Q9UPM9 204 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 HRH3Q9Y5N1 445 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 OTOFQ9HC10 1997 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 OR6C65A6NJZ3 312 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 CYR61O00622 381 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 BPNT1O95861 308 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 TNFSF4P23510 183 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 TMEM81Q6P7N7 255 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 SIAH3Q8IW03 269 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 OR4K15Q8NH41 348 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 ANKRD9Q96BM1 317 aaPredicted RBP12.51□□□□□ -0.41
BRAT1-203ENST00000467558 TXNDC15Q96J42 360 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 DCLRE1CQ96SD1 692 aaKnown RBP12.51□□□□□ -0.41
BRAT1-203ENST00000467558 MAN2C1Q9NTJ4 1040 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 IFNA5P01569 189 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 TCRBP04435 133 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 SERPINE2P07093 398 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 APEHP13798 732 aaKnown RBP12.51□□□□□ -0.41
BRAT1-203ENST00000467558 SOX18P35713 384 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 TGFBR1P36897 503 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 SLC10A1Q14973 349 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 IDO2Q6ZQW0 420 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 ANGPTL5Q86XS5 388 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 ZFAND1Q8TCF1 268 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 GIMAP1Q8WWP7 306 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 HSD17B8Q92506 261 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 PSMF1Q92530 271 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 GPR160Q9UJ42 338 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 KCNG2Q9UJ96 466 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 PCDHGA1Q9Y5H4 931 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 TMEM82A0PJX8 343 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 CXCL13O43927 109 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 ZNF780AO75290 641 aaPredicted RBP12.51□□□□□ -0.41
BRAT1-203ENST00000467558 PEBP1P30086 187 aaKnown RBP12.51□□□□□ -0.41
BRAT1-203ENST00000467558 CX3CR1P49238 355 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
BRAT1-203ENST00000467558 RAP2BP61225 183 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 CORO6Q6QEF8 472 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 OR52N5Q8NH56 324 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 STOML3Q8TAV4 291 aa12.51□□□□□ -0.41
BRAT1-203ENST00000467558 MED18Q9BUE0 208 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms