RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 CHRAC1Q9NRG0 131 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 CCDC59Q9P031 241 aaKnown RBP2.83□□□□□ -1.96
VPS13A-209ENST00000467124 STOX2Q9P2F5 926 aaPredicted RBP2.83□□□□□ -1.96
VPS13A-209ENST00000467124 TP53TG5Q9Y2B4 290 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 NFASCO94856 1347 aa2.83□□□□□ -1.96
VPS13A-209ENST00000467124 TDRD6O60522 2096 aaKnown RBP2.82□□□□□ -1.96
VPS13A-209ENST00000467124 LOC100653049A0A140TA62 436 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 KBTBD11-OT1A0A1B0GTJ5 212 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 H3BNH8 94 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 M0R3G1 203 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 NDUFAB1O14561 156 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 CD5LO43866 347 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 RDH16O75452 317 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 KRT34O76011 436 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 SRP72O76094 671 aaKnown RBP2.82□□□□□ -1.96
VPS13A-209ENST00000467124 IGLV1-47P01700 117 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 FABP3P05413 133 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 IGHV4-34P06331 123 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 EIF4EP06730 217 aaKnown RBP2.82□□□□□ -1.96
VPS13A-209ENST00000467124 KRT16P08779 473 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 GNAO1P09471 354 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 CLTAP09496 248 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 IGHV3-43DP0DP04 118 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 CSNK2A2P19784 350 aaPredicted RBP2.82□□□□□ -1.96
VPS13A-209ENST00000467124 CCNE1P24864 410 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 FOXN2P32314 431 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 NBL1P41271 181 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 MRPL19P49406 292 aaKnown RBP2.82□□□□□ -1.96
VPS13A-209ENST00000467124 SP4Q02446 784 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 RCAN2Q14206 197 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 ZNF266Q14584 549 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 RSPO1Q2MKA7 263 aaPredicted RBP2.82□□□□□ -1.96
VPS13A-209ENST00000467124 HSDL1Q3SXM5 330 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 CAVIN4Q5BKX8 364 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 TTC23LQ6PF05 361 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 ANGPTL8Q6UXH0 198 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 CERS6Q6ZMG9 384 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 LRRC75AQ8NAA5 344 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 ACTRT1Q8TDG2 376 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 GPX8Q8TED1 209 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 LRRC29Q8WV35 223 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 CDC42EP4Q9H3Q1 356 aaKnown RBP2.82□□□□□ -1.96
VPS13A-209ENST00000467124 TMEM165Q9HC07 324 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 CLN8Q9UBY8 286 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 LGALS13Q9UHV8 139 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 CACNG2Q9Y698 323 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 MAP3K15Q6ZN16 1313 aa2.82□□□□□ -1.96
VPS13A-209ENST00000467124 A0A0B4J2A0 478 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 C11orf94C9JXX5 98 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 SMKR1H3BMG3 65 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 PANO1I0J062 215 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 L7N2F9 121 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 BCKDKO14874 412 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 SLC31A2O15432 143 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 ICOSLGO75144 302 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 FLOT1O75955 427 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 C6orf47O95873 294 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 SERPINE2P07093 398 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 TDGF1P13385 188 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 PEX19P40855 299 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 SERPINB8P50452 374 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 TDGF1P3P51864 188 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 CRISP3P54108 245 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 RAB11AP62491 216 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 SLC7A9P82251 487 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 CKAP4Q07065 602 aaKnown RBP2.81□□□□□ -1.96
VPS13A-209ENST00000467124 RAB11BQ15907 218 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 ZNF726P1Q15940 193 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 ZNF493Q6ZR52 646 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 TMEM179Q6ZVK1 233 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 COX15Q7KZN9 410 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 STRADAQ7RTN6 431 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 OR10G9Q8NGN4 311 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 OR5K2Q8NHB8 316 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 MCOLN3Q8TDD5 553 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 GLYATL2Q8WU03 294 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 APH1AQ96BI3 265 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 CERS2Q96G23 380 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 RNF185Q96GF1 192 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 MICU1Q9BPX6 476 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 PIGUQ9H490 435 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 MRPS30Q9NP92 439 aaKnown RBP2.81□□□□□ -1.96
VPS13A-209ENST00000467124 ABCB10Q9NRK6 738 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 SHPKQ9UHJ6 478 aa2.81□□□□□ -1.96
VPS13A-209ENST00000467124 TP53BP1Q12888 1972 aaPredicted RBP2.8□□□□□ -1.96
VPS13A-209ENST00000467124 ARHGAP23Q9P227 1491 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 PLEKHG2Q9H7P9 1386 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 MROH7-TTC4A0A0A0MT08 1334 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 MROH7Q68CQ1 1323 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 KLLNB2CW77 178 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 H0YHG0 523 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 K7EMT4 169 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 PEX7O00628 323 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 PLPP1O14494 284 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 XKRYO14609 159 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 SCAMP2O15127 329 aaKnown RBP2.8□□□□□ -1.96
VPS13A-209ENST00000467124 CA11O75493 328 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 IGLV2-23P01705 113 aa2.8□□□□□ -1.96
VPS13A-209ENST00000467124 ARG1P05089 322 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms