RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SLC30A7Q8NEW0 376 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 TMEM255BQ8WV15 326 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 MRPS24Q96EL2 167 aaKnown RBP7.99□□□□□ -1.13
HPS4-209ENST00000466781 EXOSC3Q9NQT5 275 aaKnown RBP7.99□□□□□ -1.13
HPS4-209ENST00000466781 M0R296 226 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 LGI1O95970 557 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 FURINP09958 794 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 LAP3P28838 519 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 CLDN12P56749 244 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 HTRA4P83105 476 aaPredicted RBP7.99□□□□□ -1.13
HPS4-209ENST00000466781 PMPCAQ10713 525 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 KCNAB1Q14722 419 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 MEP1BQ16820 701 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 LHFPL2Q6ZUX7 228 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 MDGA2Q7Z553 956 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 ADGRG3Q86Y34 549 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 EGFL6Q8IUX8 553 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 FAM71CQ8NEG0 241 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 STACQ99469 402 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 SLC31A2O15432 143 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 NME2P22392 152 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 DTYMKP23919 212 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 HOXD12P35452 270 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 FOXK2Q01167 660 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 ELAVL1Q15717 326 aaKnown RBP7.99□□□□□ -1.13
HPS4-209ENST00000466781 NKAIN1Q4KMZ8 207 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 NXNL2Q5VZ03 156 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 SLC48A1Q6P1K1 146 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 CDC20BQ86Y33 519 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 UBTD2Q8WUN7 234 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 SLC38A5Q8WUX1 472 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 FGF14Q92915 247 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 CMTM3Q96MX0 182 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 COPS3Q9UNS2 423 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 NPFFR2Q9Y5X5 522 aa7.99□□□□□ -1.13
HPS4-209ENST00000466781 BHLHE40O14503 412 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 TXNL1O43396 289 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 CRYAAP02489 173 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 RPS16P62249 146 aaKnown RBP7.98□□□□□ -1.13
HPS4-209ENST00000466781 RPS25P62851 125 aaKnown RBP7.98□□□□□ -1.13
HPS4-209ENST00000466781 CRMP1Q14194 572 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 OR2G6Q5TZ20 316 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 GDF7Q7Z4P5 450 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 TSEN54Q7Z6J9 526 aaKnown RBP7.98□□□□□ -1.13
HPS4-209ENST00000466781 BATF2Q8N1L9 274 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 LKAAEAR1Q8TD35 194 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 RASD2Q96D21 266 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 CSF3RQ99062 836 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 NT5DC2Q9H857 520 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 BCO1Q9HAY6 547 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 WNT16Q9UBV4 365 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 GOLT1BQ9Y3E0 138 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 TIMM10BQ9Y5J6 103 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 HRH3Q9Y5N1 445 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 PLXNB2O15031 1838 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 SLC16A6O15403 523 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 DFFBO76075 338 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 SORBS2O94875 1100 aaKnown RBP7.98□□□□□ -1.13
HPS4-209ENST00000466781 ELK1P19419 428 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 SSTR2P30874 369 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 SRP14P37108 136 aaKnown RBP7.98□□□□□ -1.13
HPS4-209ENST00000466781 MS4A2Q01362 244 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 ZNF91Q05481 1191 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 VWA2Q5GFL6 755 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 CMTM4Q8IZR5 234 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 SVBPQ8N300 66 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 ZNRF4Q8WWF5 429 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 TMIGD2Q96BF3 282 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 PDXPQ96GD0 296 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 CRLF2Q9HC73 371 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 CHST11Q9NPF2 352 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 COA3Q9Y2R0 106 aaPredicted RBP7.98□□□□□ -1.13
HPS4-209ENST00000466781 ANKRD31Q8N7Z5 1873 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 CPEP16870 476 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 CR2P20023 1033 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 LEXMQ3ZCV2 418 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 BTLAQ7Z6A9 289 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 LILRA2Q8N149 483 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 FBXL14Q8N1E6 418 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 SUMF1Q8NBK3 374 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 ARRDC2Q8TBH0 407 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 TMEM106AQ96A25 262 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 GLIPR2Q9H4G4 154 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 PTTG3PQ9NZH4 202 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 COLQQ9Y215 455 aaPredicted RBP7.98□□□□□ -1.13
HPS4-209ENST00000466781 KIR2DS1A0A191URI9 304 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 SIRPB1O00241 398 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 ARPC3O15145 178 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 SELENOFO60613 162 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 KIR2DS4P43632 304 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 RPL27P61353 136 aaKnown RBP7.98□□□□□ -1.13
HPS4-209ENST00000466781 KIR2DS1Q14954 304 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 HENMT1Q5T8I9 393 aaKnown RBP7.98□□□□□ -1.13
HPS4-209ENST00000466781 TBPL2Q6SJ96 375 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 THNSL2Q86YJ6 484 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 LGI3Q8N145 548 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 DNAJC5GQ8N7S2 189 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 KCTD12Q96CX2 325 aaKnown RBP7.98□□□□□ -1.13
HPS4-209ENST00000466781 ATOH8Q96SQ7 321 aa7.98□□□□□ -1.13
HPS4-209ENST00000466781 SORT1Q99523 831 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms