RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 SLC5A7Q9GZV3 580 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 TMEM117Q9H0C3 514 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 ILKAPQ9H0C8 392 aaPredicted RBP2.83□□□□□ -1.96
VPS13D-203ENST00000466732 ZBP1Q9H171 429 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 ANKRD19PQ9H560 264 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 SRD5A3Q9H8P0 318 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 NGBQ9NPG2 151 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 GDF3Q9NR23 364 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 NANSQ9NR45 359 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 ZCCHC3Q9NUD5 404 aaKnown RBP2.83□□□□□ -1.96
VPS13D-203ENST00000466732 MS4A12Q9NXJ0 267 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 COPZ2Q9P299 210 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 NDRG2Q9UN36 371 aaKnown RBP2.83□□□□□ -1.96
VPS13D-203ENST00000466732 KCNIP3Q9Y2W7 256 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 PHIPQ8WWQ0 1821 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 ABCC4O15439 1325 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 PTPRFP10586 1907 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 MTCL1Q9Y4B5 1905 aaKnown RBP2.83□□□□□ -1.96
VPS13D-203ENST00000466732 CFTRP13569 1480 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 ARAP3Q8WWN8 1544 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 ADAMTS12P58397 1594 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 NEURL4Q96JN8 1562 aa2.83□□□□□ -1.96
VPS13D-203ENST00000466732 MYO3AQ8NEV4 1616 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 CRYBG1Q9Y4K1 1723 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 N4BP2Q86UW6 1770 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 SCN4AP35499 1836 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 RALGAPA1Q6GYQ0 2036 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 A0A087X0K7 114 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 CCDC182A6NF36 153 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 NPIPA7E9PJI5 369 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 H0YIG0 161 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 TMX2-CTNND1H3BSU7 103 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 TLR4O00206 839 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 PRRG1O14668 218 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 GPAA1O43292 621 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 SDC3O75056 442 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 UGT2B11O75310 529 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 RAD51DO75771 328 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 TGFAP01135 160 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 PCCBP05166 539 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 UGT2B4P06133 528 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 CHRNGP07510 517 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 APRTP07741 180 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 NPIPA8P0DM63 369 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 CALCBP10092 127 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 THRBP10828 461 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 CCL2P13500 99 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 FOSL2P15408 326 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 MUC1P15941 1255 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF7P17097 686 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 CNR1P21554 472 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 NAA10P41227 235 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 SERPINB10P48595 397 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 HLCSP50747 726 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 HSPA2P54652 639 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 UGT2B15P54855 530 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 HMGCS2P54868 508 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 MAGOHP61326 146 aaKnown RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 RPL27P61353 136 aaKnown RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 IGLV3-21P80748 117 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 TNFRSF9Q07011 255 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 ARHGAP1Q07960 439 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 RGS1Q08116 209 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 MFGE8Q08431 387 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 FGL1Q08830 312 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 CRMP1Q14194 572 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 ABRAXAS2Q15018 415 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 ATP6AP1Q15904 470 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 C5orf64Q2M2E5 130 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 DEFB115Q30KQ5 88 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 NDUFAF6Q330K2 333 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 SFT2D3Q587I9 215 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 RNASE10Q5GAN6 216 aaKnown RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 NHSL2Q5HYW2 709 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 CELF3Q5SZQ8 465 aaKnown RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF470Q6ECI4 717 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 OR6B2Q6IFH4 312 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 TMEM270Q6UE05 265 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 SPESP1Q6UW49 350 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 PAMR1Q6UXH9 720 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 CYHR1Q6ZMK1 362 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 LINC00696Q6ZRV3 163 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 VTCN1Q7Z7D3 282 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 DHDDSQ86SQ9 333 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 GALNT10Q86SR1 603 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 SLC22A16Q86VW1 577 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 COMMD7Q86VX2 200 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 AMZ2Q86W34 360 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 PHF13Q86YI8 300 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 TMEM126BQ8IUX1 230 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 KATNAL2Q8IYT4 538 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 RDH10Q8IZV5 341 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 SLC34A3Q8N130 599 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 ARRDC1Q8N5I2 433 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 EIF4E3Q8N5X7 224 aaKnown RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 CHDHQ8NE62 594 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 FAM83FQ8NEG4 500 aaPredicted RBP2.82□□□□□ -1.96
VPS13D-203ENST00000466732 CCDC54Q8NEL0 328 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 OR8J1Q8NGP2 316 aa2.82□□□□□ -1.96
VPS13D-203ENST00000466732 OR2V1Q8NHB1 315 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms