RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 SELENOWP63302 87 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 RUNX1T1Q06455 604 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 VEZF1Q14119 521 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 P2RY6Q15077 328 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 PPA1Q15181 289 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 MAPRE2Q15555 327 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 ZSWIM7Q19AV6 140 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 DEFB113Q30KQ7 82 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 PGGHGQ32M88 737 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 IQCCQ4KMZ1 466 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 MORN5Q5VZ52 161 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 CARD17Q5XLA6 110 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 SFRP4Q6FHJ7 346 aaPredicted RBP4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 TMEM225Q6GV28 225 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 SLC18B1Q6NT16 456 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 ADAM5Q6NVV9 412 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF613Q6PF04 617 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 TBPL2Q6SJ96 375 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 HACD2Q6Y1H2 254 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 B3GLCTQ6Y288 498 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 SPNS3Q6ZMD2 512 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF704Q6ZNC4 412 aaPredicted RBP4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 H1FNTQ75WM6 255 aaPredicted RBP4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 AAED1Q7RTV5 226 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 CPLX4Q7Z7G2 160 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 RANBP3LQ86VV4 465 aaPredicted RBP4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 PCYOX1LQ8NBM8 494 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 DNAJA4Q8WW22 397 aaPredicted RBP4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 HSD17B8Q92506 261 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 ZHX1-C8orf76Q96EF9 292 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 TPD52L3Q96J77 140 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF48Q96MX3 618 aaPredicted RBP4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 MUS81Q96NY9 551 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 OXGR1Q96P68 337 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 ALKBH3Q96Q83 286 aaPredicted RBP4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 OR2M2Q96R28 347 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 TMEM43Q9BTV4 400 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 SF3B5Q9BWJ5 86 aaKnown RBP4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 TAPBPLQ9BX59 468 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 NSRP1Q9H0G5 558 aaKnown RBP4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 OR10A4Q9H209 315 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 ARMC7Q9H6L4 198 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 EFCAB1Q9HAE3 211 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 C12orf10Q9HB07 376 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 TMEM27Q9HBJ8 222 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 NOX3Q9HBY0 568 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 NRIP3Q9NQ35 241 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 GID8Q9NWU2 228 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF226Q9NYT6 803 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF224Q9NZL3 707 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 EMC3Q9P0I2 261 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 ABCD2Q9UBJ2 740 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 RIMS3Q9UJD0 308 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 SLC9A8Q9Y2E8 581 aa4.17□□□□□ -1.74
EXOSC3-204ENST00000465860 ABCA2Q9BZC7 2435 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 IGKV1D-43A0A0B4J1Z2 117 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 CIB4A0PJX0 185 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 ENO4A6NNW6 628 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 E7EQL1 145 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 CDC42EP2O14613 210 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 HS3ST1O14792 307 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 CLOCKO15516 846 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 CCDC22O60826 627 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 DIRAS1O95057 198 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF682O95780 498 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 SEMG1P04279 462 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 TSPAN19P0C672 248 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 ASAH2BP0C7U1 165 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 ADORA3P0DMS8 318 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF26P17031 533 aaPredicted RBP4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 GGT1P19440 569 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 TCN1P20061 433 aaPredicted RBP4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 DNASE1P24855 282 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 CDKN1AP38936 164 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 AQP2P41181 271 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF83P51522 516 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 LOXL3P58215 753 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 NCALDP61601 193 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 NKX6-1P78426 367 aaPredicted RBP4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 ARF1P84077 181 aaKnown RBP4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 IL1RL1Q01638 556 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 ROR2Q01974 943 aaKnown RBP4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 POU3F1Q03052 451 aaPredicted RBP4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 PUDPQ08623 228 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 CAMK2DQ13557 499 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 KEAP1Q14145 624 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 MELKQ14680 651 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 SEC23BQ15437 767 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 ACKR1Q16570 336 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF74Q16587 644 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 CEACAM16Q2WEN9 425 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 ZNF672Q499Z4 452 aaPredicted RBP4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 BEX5Q5H9J7 111 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 TIMM23BQ5SRD1 257 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 INTS11Q5TA45 600 aaKnown RBP4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 ERICH5Q6P6B1 374 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 RINLQ6ZS11 566 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 SLC30A8Q8IWU4 369 aa4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 CIARTQ8N365 385 aaPredicted RBP4.16□□□□□ -1.74
EXOSC3-204ENST00000465860 CLDN22Q8N7P3 220 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms