RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 CRYAAP02489 173 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 DANCRP0C864 163 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 CLUP10909 449 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 NR2C1P13056 603 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 ZNF23P17027 643 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 MSR1P21757 451 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 APEX1P27695 318 aaKnown RBP10.1□□□□□ -0.79
CUX1-207ENST00000465461 PYCR1P32322 319 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 CDKN1AP38936 164 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 FABP6P51161 128 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 ARHGDIAP52565 204 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 PSG4Q00888 419 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 GK3PQ14409 553 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 DEFB113Q30KQ7 82 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 SLC36A2Q495M3 483 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 PABPC1L2AQ5JQF8 200 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 FAM27BQ5VT28 67 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 TMEM236Q5W0B7 351 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 KRT80Q6KB66 452 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 ACSM5Q6NUN0 579 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 RPL13AP3Q6NVV1 102 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 TMEM53Q6P2H8 277 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 CD300LDQ6UXZ3 194 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 C20orf204Q6ZNR8 217 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 ADCK1Q86TW2 530 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 FAM169BQ8N8A8 192 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 SLC37A3Q8NCC5 494 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 ICA1LQ8NDH6 482 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 OR51L1Q8NGJ5 315 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 OR9Q1Q8NGQ5 310 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 TEX47Q8TBZ9 253 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 C11orf40Q8WZ69 217 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 NINJ1Q92982 152 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 DDOQ99489 341 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 ZNF416Q9BWM5 594 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 KCNN2Q9H2S1 579 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 OR51B6Q9H340 312 aa10.1□□□□□ -0.79
CUX1-207ENST00000465461 IGLV1-36A0A0B4J1U3 117 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 SAC3D1A6NKF1 404 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 FAM183AA6NL82 134 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 G3V2T6 193 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 IDH3BO43837 385 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 AHCYL1O43865 530 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 SERPINA5P05154 406 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 GYPBP06028 91 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 CST2P09228 141 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 ZNF35P13682 527 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 OSMP13725 252 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 ANXA8P13928 327 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 CCNOP22674 350 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 TTKP33981 857 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 THBS4P35443 961 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 GUCA1AP43080 201 aaPredicted RBP10.09□□□□□ -0.79
CUX1-207ENST00000465461 HSF2Q03933 536 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 COX10Q12887 443 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 CRMP1Q14194 572 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 GINS1Q14691 196 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 C3orf36Q3SXR2 165 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 NRN1LQ496H8 165 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 C1QTNF12Q5T7M4 302 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 ZNF774Q6NX45 483 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 LYPD4Q6UWN0 246 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 GLB1L2Q8IW92 636 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 LNX2Q8N448 690 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 SLC30A7Q8NEW0 376 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 OR2T33Q8NG76 320 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 IGFBPL1Q8WX77 278 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 PERPQ96FX8 193 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 RAB3IPQ96QF0 476 aaPredicted RBP10.09□□□□□ -0.79
CUX1-207ENST00000465461 DHRS9Q9BPW9 319 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 BDH2Q9BUT1 245 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 OR2H1Q9GZK4 316 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 WNT5BQ9H1J7 359 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 MED20Q9H944 212 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 ZNF556Q9HAH1 456 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 KIF17Q9P2E2 1029 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 CSMD1Q96PZ7 3565 aa10.09□□□□□ -0.79
CUX1-207ENST00000465461 TVP23AA6NH52 213 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 GPRIN2O60269 458 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 SMPD2O60906 423 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 NDUFS7O75251 213 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 TFP02787 698 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 FAM157BP0CG42 384 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 GAAP10253 952 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 PAX7P23759 505 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 CRABP1P29762 137 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 SNTB2Q13425 540 aaKnown RBP10.08□□□□□ -0.8
CUX1-207ENST00000465461 MSMPQ1L6U9 139 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 FAHD1Q6P587 224 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 CORO6Q6QEF8 472 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 YTHDF3Q7Z739 585 aaKnown RBP10.08□□□□□ -0.8
CUX1-207ENST00000465461 HIPK1Q86Z02 1210 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 LINC00346Q8IVM7 164 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 FBXL14Q8N1E6 418 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 MUC15Q8N387 334 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 TMEM171Q8WVE6 324 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 PIGTQ969N2 578 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 OTULINQ96BN8 352 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 MBD6Q96DN6 1003 aa10.08□□□□□ -0.8
CUX1-207ENST00000465461 NRBF2Q96F24 287 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms