RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 PNLIPRP2P54317 469 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ADPRHP54922 357 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 RPS21P63220 83 aaKnown RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 PMPCAQ10713 525 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 SGCGQ13326 291 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ENPP2Q13822 863 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 GPR18Q14330 331 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 SLC17A1Q14916 467 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ELOCQ15369 112 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 MESTQ5EB52 335 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 TMEM225Q6GV28 225 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 WBP2NLQ6ICG8 309 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ASPHD2Q6ICH7 369 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 H3F3CQ6NXT2 135 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 PAPD4Q6PIY7 484 aaKnown RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 DRAM2Q6UX65 266 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 DGAT2L6Q6ZPD8 337 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 TAF8Q7Z7C8 310 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ATG4DQ86TL0 474 aaPredicted RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 PARGQ86W56 976 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 OR4N2Q8NGD1 307 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 OTOSQ8NHW6 89 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 RNF128Q8TEB7 428 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 SFT2D1Q8WV19 159 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 OIT3Q8WWZ8 545 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 RERGQ96A58 199 aaPredicted RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 PHB2Q99623 299 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 SLC6A7Q99884 636 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 APOOQ9BUR5 198 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ULBP3Q9BZM4 244 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 RNF122Q9H9V4 155 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 Q9N2J8 555 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 MMP25Q9NPA2 562 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 CXXC1Q9P0U4 656 aaPredicted RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 GRHPRQ9UBQ7 328 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 CKLFQ9UBR5 152 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 TBC1D29Q9UFV1 150 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 KLK13Q9UKR3 277 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 VSIG4Q9Y279 399 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 MRPS23Q9Y3D9 190 aaKnown RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 NUMA1Q14980 2115 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 A0A1W2PPC1 479 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 C9orf170A2RU37 121 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 MEGF11A6BM72 1044 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 C2orf72A6NCS6 295 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 OTOL1A6NHN0 477 aaPredicted RBP6.58□□□□□ -1.36
USP48-206ENST00000464577 H0YGG7 62 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 BLOC1S5-TXNDC5H3BN57 136 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 DCTN6O00399 190 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 CRHP06850 196 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 SMIM6P0DI80 62 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 SPP1P10451 314 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 RAB6AP20340 208 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 ARRB1P49407 418 aaPredicted RBP6.58□□□□□ -1.36
USP48-206ENST00000464577 ARF3P61204 181 aaPredicted RBP6.58□□□□□ -1.36
USP48-206ENST00000464577 PJVKQ0ZLH3 352 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 PPP1R1AQ13522 171 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 ATXN7L3Q14CW9 347 aaPredicted RBP6.58□□□□□ -1.36
USP48-206ENST00000464577 PDGFRLQ15198 375 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.58□□□□□ -1.36
USP48-206ENST00000464577 LRRC37A5PQ49AS3 106 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 BEX5Q5H9J7 111 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 TEX30Q5JUR7 227 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 NKAPLQ5M9Q1 402 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 NPSR1Q6W5P4 371 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 TMEM184AQ6ZMB5 413 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 RNF44Q7L0R7 432 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 ZNF627Q7L945 461 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 PRSS41Q7RTY9 318 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 DPY19L4Q7Z388 723 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 ZNF584Q8IVC4 421 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 BAP18Q8IXM2 172 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 TMEFF1Q8IYR6 380 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 PAQR4Q8N4S7 273 aaPredicted RBP6.58□□□□□ -1.36
USP48-206ENST00000464577 OR4K17Q8NGC6 315 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 OR5T3Q8NGG3 340 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 ASB12Q8WXK4 309 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 FOXRED1Q96CU9 486 aaPredicted RBP6.58□□□□□ -1.36
USP48-206ENST00000464577 TSPAN32Q96QS1 320 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 PTDSS2Q9BVG9 487 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 CAPN10Q9HC96 672 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 FGF22Q9HCT0 170 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 SRA1Q9HD15 236 aaKnown RBP6.58□□□□□ -1.36
USP48-206ENST00000464577 PRMT8Q9NR22 394 aaPredicted RBP6.58□□□□□ -1.36
USP48-206ENST00000464577 SERGEFQ9UGK8 458 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 PCOLCE2Q9UKZ9 415 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 DHDHQ9UQ10 334 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 OR10H1Q9Y4A9 318 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 TRPM6Q9BX84 2022 aa6.58□□□□□ -1.36
USP48-206ENST00000464577 PRSS38A1L453 326 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 OR6C76A6NM76 312 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 ZNF208O43345 1280 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 EML2O95834 649 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 CRYBA1P05813 215 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 CD2P06729 351 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 DCNP07585 359 aaKnown RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 HOXC4P09017 264 aaPredicted RBP6.57□□□□□ -1.36
USP48-206ENST00000464577 FBXO45P0C2W1 286 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 ZNF28P17035 718 aa6.57□□□□□ -1.36
USP48-206ENST00000464577 PSMB6P28072 239 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms