RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 OR10G4Q8NGN3 311 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 ZFP90Q8TF47 636 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 ZNF160Q9HCG1 818 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 KCNJ16Q9NPI9 418 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 GPATCH2LQ9NWQ4 482 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 KLK12Q9UKR0 248 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 MRPS18BQ9Y676 258 aaKnown RBP2.6□□□□□ -1.99
CLK1-208ENST00000464454 MAPK8IP3Q9UPT6 1336 aa2.6□□□□□ -1.99
CLK1-208ENST00000464454 SNAI2O43623 268 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 KLHL41O60662 606 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 DPM1O60762 260 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 SPAG7O75391 227 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 SRP72O76094 671 aaKnown RBP2.59□□□□□ -1.99
CLK1-208ENST00000464454 FABP3P05413 133 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 RETP07949 1114 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 LONP1P36776 959 aaKnown RBP2.59□□□□□ -1.99
CLK1-208ENST00000464454 RPS15P62841 145 aaKnown RBP2.59□□□□□ -1.99
CLK1-208ENST00000464454 SLC25A11Q02978 314 aaKnown RBP2.59□□□□□ -1.99
CLK1-208ENST00000464454 ZSCAN26Q16670 478 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 ALKBH6Q3KRA9 238 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 THEM4Q5T1C6 240 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 KHDRBS2Q5VWX1 349 aaKnown RBP2.59□□□□□ -1.99
CLK1-208ENST00000464454 BZW1Q7L1Q6 419 aaKnown RBP2.59□□□□□ -1.99
CLK1-208ENST00000464454 LUZP2Q86TE4 346 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 MMAAQ8IVH4 418 aaKnown RBP2.59□□□□□ -1.99
CLK1-208ENST00000464454 SAXO1Q8IYX7 474 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 OR5B3Q8NH48 314 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 CREB3L1Q96BA8 519 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 DNAJC1Q96KC8 554 aaKnown RBP2.59□□□□□ -1.99
CLK1-208ENST00000464454 WFIKKN1Q96NZ8 548 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 PLA2G2FQ9BZM2 168 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 LHX9Q9NQ69 397 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 HRASLS2Q9NWW9 162 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 OR12D3Q9UGF7 316 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 LGALS13Q9UHV8 139 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 TBX21Q9UL17 535 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 VANGL2Q9ULK5 521 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 LRP4O75096 1905 aa2.59□□□□□ -1.99
CLK1-208ENST00000464454 IGHV3-66A0A0C4DH42 116 aa2.58□□□□□ -2
CLK1-208ENST00000464454 SPECC1L-ADORA2AF8WAN1 911 aa2.58□□□□□ -2
CLK1-208ENST00000464454 DNALI1O14645 258 aaPredicted RBP2.58□□□□□ -2
CLK1-208ENST00000464454 MAGEB4O15481 346 aaPredicted RBP2.58□□□□□ -2
CLK1-208ENST00000464454 ANGPTL7O43827 346 aa2.58□□□□□ -2
CLK1-208ENST00000464454 OR2F2O95006 317 aa2.58□□□□□ -2
CLK1-208ENST00000464454 MYL2P10916 166 aa2.58□□□□□ -2
CLK1-208ENST00000464454 PRPS2P11908 318 aa2.58□□□□□ -2
CLK1-208ENST00000464454 CCNB1P14635 433 aa2.58□□□□□ -2
CLK1-208ENST00000464454 RAB3BP20337 219 aa2.58□□□□□ -2
CLK1-208ENST00000464454 CEACAM6P40199 344 aa2.58□□□□□ -2
CLK1-208ENST00000464454 PPOXP50336 477 aa2.58□□□□□ -2
CLK1-208ENST00000464454 MXD1Q05195 221 aa2.58□□□□□ -2
CLK1-208ENST00000464454 LRRC63Q05C16 580 aa2.58□□□□□ -2
CLK1-208ENST00000464454 MERTKQ12866 999 aa2.58□□□□□ -2
CLK1-208ENST00000464454 MADCAM1Q13477 382 aa2.58□□□□□ -2
CLK1-208ENST00000464454 GINS1Q14691 196 aa2.58□□□□□ -2
CLK1-208ENST00000464454 SF3A2Q15428 464 aaKnown RBP2.58□□□□□ -2
CLK1-208ENST00000464454 CHRNA6Q15825 494 aa2.58□□□□□ -2
CLK1-208ENST00000464454 KCTD19Q17RG1 926 aaPredicted RBP2.58□□□□□ -2
CLK1-208ENST00000464454 SOHLH1Q5JUK2 328 aa2.58□□□□□ -2
CLK1-208ENST00000464454 SPECC1LQ69YQ0 1117 aa2.58□□□□□ -2
CLK1-208ENST00000464454 OR52W1Q6IF63 320 aa2.58□□□□□ -2
CLK1-208ENST00000464454 TTC23LQ6PF05 361 aa2.58□□□□□ -2
CLK1-208ENST00000464454 IGFL3Q6UXB1 125 aa2.58□□□□□ -2
CLK1-208ENST00000464454 SCD5Q86SK9 330 aa2.58□□□□□ -2
CLK1-208ENST00000464454 C12orf56Q8IXR9 622 aa2.58□□□□□ -2
CLK1-208ENST00000464454 CMTM1Q8IZ96 169 aa2.58□□□□□ -2
CLK1-208ENST00000464454 PRELID2Q8N945 189 aa2.58□□□□□ -2
CLK1-208ENST00000464454 OR2A1Q8NGT9 310 aa2.58□□□□□ -2
CLK1-208ENST00000464454 TSEN15Q8WW01 171 aaKnown RBP2.58□□□□□ -2
CLK1-208ENST00000464454 STARD8Q92502 1023 aa2.58□□□□□ -2
CLK1-208ENST00000464454 BMFQ96LC9 184 aa2.58□□□□□ -2
CLK1-208ENST00000464454 PANX1Q96RD7 426 aa2.58□□□□□ -2
CLK1-208ENST00000464454 PARP12Q9H0J9 701 aaKnown RBP2.58□□□□□ -2
CLK1-208ENST00000464454 VCXQ9H320 206 aa2.58□□□□□ -2
CLK1-208ENST00000464454 NOX3Q9HBY0 568 aa2.58□□□□□ -2
CLK1-208ENST00000464454 SLC40A1Q9NP59 571 aa2.58□□□□□ -2
CLK1-208ENST00000464454 ISYNA1Q9NPH2 558 aa2.58□□□□□ -2
CLK1-208ENST00000464454 FAM49BQ9NUQ9 324 aa2.58□□□□□ -2
CLK1-208ENST00000464454 GCNT4Q9P109 453 aa2.58□□□□□ -2
CLK1-208ENST00000464454 MN1Q10571 1320 aaPredicted RBP2.58□□□□□ -2
CLK1-208ENST00000464454 LYRM9A8MSI8 78 aa2.57□□□□□ -2
CLK1-208ENST00000464454 ANKRD63C9JTQ0 380 aa2.57□□□□□ -2
CLK1-208ENST00000464454 INS-IGF2F8WCM5 200 aa2.57□□□□□ -2
CLK1-208ENST00000464454 CHST1O43916 411 aa2.57□□□□□ -2
CLK1-208ENST00000464454 HUS1O60921 280 aa2.57□□□□□ -2
CLK1-208ENST00000464454 ACSM4P0C7M7 580 aa2.57□□□□□ -2
CLK1-208ENST00000464454 F2RP25116 425 aa2.57□□□□□ -2
CLK1-208ENST00000464454 GTF2E2P29084 291 aaKnown RBP2.57□□□□□ -2
CLK1-208ENST00000464454 GPX4P36969 197 aaPredicted RBP2.57□□□□□ -2
CLK1-208ENST00000464454 KRTAP10-8P60410 259 aa2.57□□□□□ -2
CLK1-208ENST00000464454 STXBP1P61764 594 aaKnown RBP2.57□□□□□ -2
CLK1-208ENST00000464454 LIPEQ05469 1076 aa2.57□□□□□ -2
CLK1-208ENST00000464454 UBE2SQ16763 222 aa2.57□□□□□ -2
CLK1-208ENST00000464454 DEFB116Q30KQ4 102 aa2.57□□□□□ -2
CLK1-208ENST00000464454 FAM92BQ6ZTR7 304 aa2.57□□□□□ -2
CLK1-208ENST00000464454 CMC1Q7Z7K0 106 aa2.57□□□□□ -2
CLK1-208ENST00000464454 TMEM150AQ86TG1 271 aa2.57□□□□□ -2
CLK1-208ENST00000464454 CCDC148Q8NFR7 591 aa2.57□□□□□ -2
CLK1-208ENST00000464454 OR10J6PQ8NGY7 276 aa2.57□□□□□ -2
CLK1-208ENST00000464454 DUS3LQ96G46 650 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms