RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 OR10A6Q8NH74 314 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 AKR7LQ8NHP1 331 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 SLC25A40Q8TBP6 338 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 TMEM255BQ8WV15 326 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 C22orf15Q8WYQ4 148 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 HDAC2Q92769 488 aaKnown RBP19.16■□□□□ 0.66
USP4-208ENST00000464168 DVL3Q92997 716 aaPredicted RBP19.16■□□□□ 0.66
USP4-208ENST00000464168 OR2J1Q9GZK6 312 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 SMURF2Q9HAU4 748 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 KLHL21Q9UJP4 597 aa19.16■□□□□ 0.66
USP4-208ENST00000464168 PLSCR5A0PG75 271 aa19.15■□□□□ 0.66
USP4-208ENST00000464168 ANGPT2O15123 496 aa19.15■□□□□ 0.66
USP4-208ENST00000464168 ADH4P08319 380 aa19.15■□□□□ 0.66
USP4-208ENST00000464168 RBM34P42696 430 aaKnown RBP19.15■□□□□ 0.66
USP4-208ENST00000464168 GDI2P50395 445 aaKnown RBP19.15■□□□□ 0.66
USP4-208ENST00000464168 UBA52P62987 128 aaKnown RBP19.15■□□□□ 0.66
USP4-208ENST00000464168 FMODQ06828 376 aa19.15■□□□□ 0.66
USP4-208ENST00000464168 LAPTM4AQ15012 233 aa19.15■□□□□ 0.66
USP4-208ENST00000464168 SPRNQ5BIV9 151 aa19.15■□□□□ 0.66
USP4-208ENST00000464168 INTS11Q5TA45 600 aaKnown RBP19.15■□□□□ 0.66
USP4-208ENST00000464168 AGBL2Q5U5Z8 902 aa19.15■□□□□ 0.66
USP4-208ENST00000464168 CCDC80Q76M96 950 aa19.15■□□□□ 0.66
USP4-208ENST00000464168 LIPHQ8WWY8 451 aa19.15■□□□□ 0.66
USP4-208ENST00000464168 SGTBQ96EQ0 304 aa19.15■□□□□ 0.66
USP4-208ENST00000464168 EGLN1Q9GZT9 426 aa19.15■□□□□ 0.66
USP4-208ENST00000464168 ISPDA4D126 451 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 IGF2P01344 180 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 FPR2P25090 351 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 ZFP36P26651 326 aaKnown RBP19.14■□□□□ 0.65
USP4-208ENST00000464168 ERVK-25P63136 954 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 SLC3A1Q07837 685 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 HNRNPA0Q13151 305 aaKnown RBP19.14■□□□□ 0.65
USP4-208ENST00000464168 NFYCQ13952 458 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 VMACQ2NL98 169 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 TUSC1Q2TAM9 212 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 FAM27BQ5VT28 67 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 SLC25A47Q6Q0C1 308 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 RFPL4BQ6ZWI9 263 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 RASSF5Q8WWW0 418 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 NSMAFQ92636 917 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 WNT5BQ9H1J7 359 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 CYSLTR2Q9NS75 346 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 UBAP1Q9NZ09 502 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 STX18Q9P2W9 335 aaKnown RBP19.14■□□□□ 0.65
USP4-208ENST00000464168 RIMS3Q9UJD0 308 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 SH3GLB1Q9Y371 365 aa19.14■□□□□ 0.65
USP4-208ENST00000464168 NPIPB13A6NJU9 1138 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 NPIPB4C9JG80 1138 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 KCNAB3O43448 404 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 NGFP01138 241 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 VIMP08670 466 aaKnown RBP19.13■□□□□ 0.65
USP4-208ENST00000464168 TNFRSF1BP20333 461 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 LIPAP38571 399 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 PPP1CBP62140 327 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 UNQ6126/PRO20091Q6UXV3 157 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 TREML1Q86YW5 311 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 ABHD4Q8TB40 342 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 TSPEARQ8WU66 669 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 TMEM239Q8WW34 195 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 GEMIN6Q8WXD5 167 aaKnown RBP19.13■□□□□ 0.65
USP4-208ENST00000464168 OR2H1Q9GZK4 316 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 TXNIPQ9H3M7 391 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 NTN4Q9HB63 628 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 DDX28Q9NUL7 540 aaKnown RBP19.13■□□□□ 0.65
USP4-208ENST00000464168 DCAF16Q9NXF7 216 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 ZDHHC8Q9ULC8 765 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 PPIAL4AQ9Y536 164 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 PCDHGB1Q9Y5G3 927 aa19.13■□□□□ 0.65
USP4-208ENST00000464168 PPIAL4EA0A075B759 164 aa19.12■□□□□ 0.65
USP4-208ENST00000464168 PPIAL4CA0A0B4J2A2 164 aa19.12■□□□□ 0.65
USP4-208ENST00000464168 PPIAL4DF5H284 164 aa19.12■□□□□ 0.65
USP4-208ENST00000464168 ICMTO60725 284 aa19.12■□□□□ 0.65
USP4-208ENST00000464168 SHOX2O60902 331 aaPredicted RBP19.12■□□□□ 0.65
USP4-208ENST00000464168 OR5F1O95221 314 aa19.12■□□□□ 0.65
USP4-208ENST00000464168 CD55P08174 381 aa19.12■□□□□ 0.65
USP4-208ENST00000464168 PPIAL4FP0DN26 164 aa19.12■□□□□ 0.65
USP4-208ENST00000464168 TAS2R41P59536 307 aa19.12■□□□□ 0.65
USP4-208ENST00000464168 CD47Q08722 323 aa19.12■□□□□ 0.65
USP4-208ENST00000464168 PIN1Q13526 163 aaPredicted RBP19.12■□□□□ 0.65
USP4-208ENST00000464168 C1orf174Q8IYL3 243 aa19.12■□□□□ 0.65
USP4-208ENST00000464168 STON2Q8WXE9 905 aa19.12■□□□□ 0.65
USP4-208ENST00000464168 ZNF747Q9BV97 191 aa19.12■□□□□ 0.65
USP4-208ENST00000464168 MSL2Q9HCI7 577 aa19.12■□□□□ 0.65
USP4-208ENST00000464168 LAP3P28838 519 aa19.11■□□□□ 0.65
USP4-208ENST00000464168 CLDN22Q8N7P3 220 aa19.11■□□□□ 0.65
USP4-208ENST00000464168 DEFB108BQ8NET1 73 aa19.11■□□□□ 0.65
USP4-208ENST00000464168 ST7LQ8TDW4 575 aa19.11■□□□□ 0.65
USP4-208ENST00000464168 THOC1Q96FV9 657 aaKnown RBP19.11■□□□□ 0.65
USP4-208ENST00000464168 NPHS2Q9NP85 383 aa19.11■□□□□ 0.65
USP4-208ENST00000464168 MMP26Q9NRE1 261 aa19.11■□□□□ 0.65
USP4-208ENST00000464168 CGGBP1Q9UFW8 167 aaPredicted RBP19.11■□□□□ 0.65
USP4-208ENST00000464168 TIMM10BQ9Y5J6 103 aa19.11■□□□□ 0.65
USP4-208ENST00000464168 NPTNQ9Y639 398 aa19.11■□□□□ 0.65
USP4-208ENST00000464168 H3BSA7 217 aa19.1■□□□□ 0.65
USP4-208ENST00000464168 TMPRSS2O15393 492 aa19.1■□□□□ 0.65
USP4-208ENST00000464168 FOXH1O75593 365 aa19.1■□□□□ 0.65
USP4-208ENST00000464168 IGHV2-70P01814 119 aa19.1■□□□□ 0.65
USP4-208ENST00000464168 CST2P09228 141 aa19.1■□□□□ 0.65
USP4-208ENST00000464168 HKR1P10072 659 aa19.1■□□□□ 0.65
USP4-208ENST00000464168 RBMXP38159 391 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms