RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 IGHV2-70P01814 119 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 COX4I1P13073 169 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 IDO1P14902 403 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 MPV17P39210 176 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 ZNF84P51523 738 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 CDH12P55289 794 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 CLRN1P58418 232 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 FADDQ13158 208 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 C16orf87Q6PH81 154 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 DHRS4L2Q6PKH6 230 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 UNQ6126/PRO20091Q6UXV3 157 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 MSANTD1Q6ZTZ1 278 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 JAZF1Q86VZ6 243 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 HIPK4Q8NE63 616 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 OR52E2Q8NGJ4 325 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 NFKBIDQ8NI38 313 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 RP9Q8TA86 221 aaKnown RBP11.22□□□□□ -0.61
MRPL55-224ENST00000464148 DIRC2Q96SL1 478 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 PKP2Q99959 881 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 RSPO3Q9BXY4 272 aaPredicted RBP11.22□□□□□ -0.61
MRPL55-224ENST00000464148 C1orf21Q9H246 121 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 KCNN2Q9H2S1 579 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 SDR39U1Q9NRG7 319 aaPredicted RBP11.22□□□□□ -0.61
MRPL55-224ENST00000464148 PDP1Q9P0J1 537 aaPredicted RBP11.22□□□□□ -0.61
MRPL55-224ENST00000464148 ZDHHC8Q9ULC8 765 aa11.22□□□□□ -0.61
MRPL55-224ENST00000464148 TANC2Q9HCD6 1990 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 A0A1B0GUS0 222 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 ANKRD65E5RJM6 399 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 M0QZ24 198 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 PGA4P0DJD7 388 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 PGA3P0DJD8 388 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 STOMP27105 288 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 LIPAP38571 399 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 SLC6A9P48067 706 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 STX1BP61266 288 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 SEC61A1P61619 476 aaKnown RBP11.21□□□□□ -0.61
MRPL55-224ENST00000464148 HNRNPA0Q13151 305 aaKnown RBP11.21□□□□□ -0.61
MRPL55-224ENST00000464148 MAPRE2Q15555 327 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 NRN1LQ496H8 165 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 ZMAT1Q5H9K5 638 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 PABPC1L2AQ5JQF8 200 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 SWT1Q5T5J6 900 aaKnown RBP11.21□□□□□ -0.61
MRPL55-224ENST00000464148 REEP3Q6NUK4 255 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 RANBP3LQ86VV4 465 aaPredicted RBP11.21□□□□□ -0.61
MRPL55-224ENST00000464148 ZNF101Q8IZC7 436 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 PARP8Q8N3A8 854 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 KIR3DL3Q8N743 410 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 SLC25A40Q8TBP6 338 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 KLF14Q8TD94 323 aaPredicted RBP11.21□□□□□ -0.61
MRPL55-224ENST00000464148 MARS2Q96GW9 593 aaKnown RBP11.21□□□□□ -0.61
MRPL55-224ENST00000464148 BTBD10Q9BSF8 475 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 OR2J1Q9GZK6 312 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 PATZ1Q9HBE1 687 aaKnown RBP11.21□□□□□ -0.61
MRPL55-224ENST00000464148 BEX1Q9HBH7 125 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 MSL2Q9HCI7 577 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 CCNB1IP1Q9NPC3 277 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 DCAF16Q9NXF7 216 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 TAS2R5Q9NYW4 299 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 TAS2R1Q9NYW7 299 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 CGGBP1Q9UFW8 167 aaPredicted RBP11.21□□□□□ -0.61
MRPL55-224ENST00000464148 OR5V1Q9UGF6 321 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 POLR3KQ9Y2Y1 108 aaPredicted RBP11.21□□□□□ -0.61
MRPL55-224ENST00000464148 MMP24Q9Y5R2 645 aa11.21□□□□□ -0.61
MRPL55-224ENST00000464148 C5orf49A4QMS7 147 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 PRORSD1PA6NEY8 169 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 B2RBV5 119 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 HOXA3O43365 443 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-224ENST00000464148 CH25HO95992 272 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 IGHG1P01857 330 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 HIST1H2ABP04908 130 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 CRYBA1P05813 215 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 MMP7P09237 267 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-224ENST00000464148 IGHV4-38-2P0DP08 117 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 BMP2P12643 396 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 WNT5AP41221 380 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 POLR2JP52435 117 aaKnown RBP11.2□□□□□ -0.62
MRPL55-224ENST00000464148 TNFAIP6P98066 277 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-224ENST00000464148 ESCO2Q56NI9 601 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 SPRNQ5BIV9 151 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 MBNL2Q5VZF2 373 aaKnown RBP11.2□□□□□ -0.62
MRPL55-224ENST00000464148 BRICD5Q6PL45 260 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 HIST3H2AQ7L7L0 130 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 OR4F5Q8NH21 305 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 TSPEARQ8WU66 669 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 WFDC12Q8WWY7 111 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 HIST1H2ACQ93077 130 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 MCHR2Q969V1 340 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 SLC19A3Q9BZV2 496 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 PAIP1Q9H074 479 aaKnown RBP11.2□□□□□ -0.62
MRPL55-224ENST00000464148 MMP27Q9H306 513 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 NANSQ9NR45 359 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 TMEM106BQ9NUM4 274 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 ZIM2Q9NZV7 527 aa11.2□□□□□ -0.62
MRPL55-224ENST00000464148 SOX21Q9Y651 276 aaPredicted RBP11.2□□□□□ -0.62
MRPL55-224ENST00000464148 TPST2O60704 377 aa11.19□□□□□ -0.62
MRPL55-224ENST00000464148 ADH4P08319 380 aa11.19□□□□□ -0.62
MRPL55-224ENST00000464148 UMPSP11172 480 aa11.19□□□□□ -0.62
MRPL55-224ENST00000464148 TNFSF4P23510 183 aa11.19□□□□□ -0.62
MRPL55-224ENST00000464148 RBMXP38159 391 aaKnown RBP11.19□□□□□ -0.62
MRPL55-224ENST00000464148 GDI2P50395 445 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms