RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 DPY19L2P2Q6ZN68 376 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 RINLQ6ZS11 566 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 SYT3Q9BQG1 590 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 NRIP3Q9NQ35 241 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 FAM53CQ9NYF3 392 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 PRPF19Q9UMS4 504 aaKnown RBP13.98□□□□□ -0.17
COL1A1-202ENST00000463440 ZFHX3Q15911 3703 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 HIVEP2P31629 2446 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 ZANQ9Y493 2812 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 CR1P17927 2039 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 C12orf71A8MTZ7 269 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 M0R233 179 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 KRT36O76013 467 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 ADRA2AP08913 450 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 FAM157BP0CG42 384 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 T-ENOLP0DO92 83 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 ATP6V1B2P21281 511 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 STOMP27105 288 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 PCSK6P29122 969 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 RAD52P43351 418 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 SELENOVP59797 346 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 LOXL1Q08397 574 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-202ENST00000463440 TRIM25Q14258 630 aaKnown RBP13.97□□□□□ -0.17
COL1A1-202ENST00000463440 CARTPTQ16568 116 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 MSMPQ1L6U9 139 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 THSD4Q6ZMP0 1018 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 ZER1Q7Z7L7 766 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 ADCK1Q86TW2 530 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 DHFR2Q86XF0 187 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 ALDH16A1Q8IZ83 802 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 PAQR4Q8N4S7 273 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-202ENST00000463440 CPEB3Q8NE35 698 aaKnown RBP13.97□□□□□ -0.17
COL1A1-202ENST00000463440 FANK1Q8TC84 345 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 POP5Q969H6 163 aaKnown RBP13.97□□□□□ -0.17
COL1A1-202ENST00000463440 RASD2Q96D21 266 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 GPA33Q99795 319 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 PIMREGQ9BSJ6 248 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 BCL2L14Q9BZR8 327 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 MS4A5Q9H3V2 200 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 POLE4Q9NR33 117 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 REV1Q9UBZ9 1251 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 IL20RAQ9UHF4 553 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 TIMM10BQ9Y5J6 103 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 IER3IP1Q9Y5U9 82 aa13.97□□□□□ -0.17
COL1A1-202ENST00000463440 NSD1Q96L73 2696 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-202ENST00000463440 A0A1W2PPW3 197 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 LOC390937A0A1W2PQ73 354 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 SOCS2O14508 198 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 LCKP06239 509 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 APEHP13798 732 aaKnown RBP13.96□□□□□ -0.17
COL1A1-202ENST00000463440 CCNOP22674 350 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 FPR3P25089 353 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 GDI2P50395 445 aaKnown RBP13.96□□□□□ -0.17
COL1A1-202ENST00000463440 UCP2P55851 309 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 FXYD6P3P58550 94 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 PSG4Q00888 419 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 KRTAP1-1Q07627 177 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 LCN8Q6JVE9 175 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 UNQ6126/PRO20091Q6UXV3 157 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 SYT9Q86SS6 491 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 ZCCHC24Q8N2G6 241 aaKnown RBP13.96□□□□□ -0.17
COL1A1-202ENST00000463440 AKR7LQ8NHP1 331 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 BCAS4Q8TDM0 211 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 GNPDA2Q8TDQ7 276 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 C11orf40Q8WZ69 217 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 WACQ9BTA9 647 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 OR2H1Q9GZK4 316 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 C1orf21Q9H246 121 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 OR51B6Q9H340 312 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 EIF3KQ9UBQ5 218 aaKnown RBP13.96□□□□□ -0.17
COL1A1-202ENST00000463440 DUSP13Q9UII6 198 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 GPR160Q9UJ42 338 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 FZR1Q9UM11 496 aa13.96□□□□□ -0.17
COL1A1-202ENST00000463440 A0A096LNT2 108 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 SLC16A7O60669 478 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 KHDRBS3O75525 346 aaKnown RBP13.95□□□□□ -0.18
COL1A1-202ENST00000463440 STAMBPO95630 424 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 TXNDC12O95881 172 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 DAOP14920 347 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 USF1P22415 310 aaPredicted RBP13.95□□□□□ -0.18
COL1A1-202ENST00000463440 SLC6A6P31641 620 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 ENDOGQ14249 297 aaKnown RBP13.95□□□□□ -0.18
COL1A1-202ENST00000463440 RFX4Q33E94 735 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 C1orf94Q6P1W5 598 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 LRP11Q86VZ4 500 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 LINC00471Q8N535 108 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 ZNF540Q8NDQ6 660 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 POM121L2Q96KW2 1035 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 LRGUKQ96M69 825 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 ERMAPQ96PL5 475 aaPredicted RBP13.95□□□□□ -0.18
COL1A1-202ENST00000463440 ZNF416Q9BWM5 594 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 WNT5BQ9H1J7 359 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 SYT4Q9H2B2 425 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 OR52D1Q9H346 318 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 RERGLQ9H628 205 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 MAGIXQ9H6Y5 334 aa13.95□□□□□ -0.18
COL1A1-202ENST00000463440 VSX1Q9NZR4 365 aaPredicted RBP13.95□□□□□ -0.18
COL1A1-202ENST00000463440 ABCA1O95477 2261 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 TCRBV5S2A0A599 114 aa13.94□□□□□ -0.18
COL1A1-202ENST00000463440 C5orf49A4QMS7 147 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms