RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 BIDP55957 195 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 RPS23P62266 143 aaKnown RBP13.31□□□□□ -0.28
SND1-203ENST00000463020 PUDPQ08623 228 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 TSTQ16762 297 aaKnown RBP13.31□□□□□ -0.28
SND1-203ENST00000463020 LRFN4Q6PJG9 635 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 MSRB3Q8IXL7 192 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 GALNT4Q8N4A0 578 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 SLC22A24Q8N4F4 322 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 SLC30A7Q8NEW0 376 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 CANT1Q8WVQ1 401 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 TMEM54Q969K7 222 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 SLCO4A1Q96BD0 722 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 ZNF48Q96MX3 618 aaPredicted RBP13.31□□□□□ -0.28
SND1-203ENST00000463020 JMJD8Q96S16 334 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 FAM192AQ9GZU8 254 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 PAIP1Q9H074 479 aaKnown RBP13.31□□□□□ -0.28
SND1-203ENST00000463020 C7orf69Q9H7B7 122 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.31□□□□□ -0.28
SND1-203ENST00000463020 EGFL7Q9UHF1 273 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 AURKCQ9UQB9 309 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 IFT52Q9Y366 437 aa13.31□□□□□ -0.28
SND1-203ENST00000463020 A0A0B4J2E0 115 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 A0A1B0GX12 115 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 DNAJC9-AS1A6NH13 148 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 C11orf98E9PRG8 122 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 BCL10O95999 233 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 CSNK1A1P48729 337 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 KLF3P57682 345 aaPredicted RBP13.3□□□□□ -0.28
SND1-203ENST00000463020 PMS2P3Q13401 168 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 MELKQ14680 651 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 CYP51A1Q16850 503 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 RABL3Q5HYI8 236 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 KLF17Q5JT82 389 aaPredicted RBP13.3□□□□□ -0.28
SND1-203ENST00000463020 SHISA2Q6UWI4 295 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 DLEU7Q6UYE1 221 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 ZBTB49Q6ZSB9 765 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 MSANTD1Q6ZTZ1 278 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 NFKBIDQ8NI38 313 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 NANPQ8TBE9 248 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 GTF2H4Q92759 462 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 ITCHQ96J02 903 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 NSMCE2Q96MF7 247 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 C9orf16Q9BUW7 83 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 SEMA6AQ9H2E6 1030 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 MRPL39Q9NYK5 338 aaKnown RBP13.3□□□□□ -0.28
SND1-203ENST00000463020 SLC25A37Q9NYZ2 338 aa13.3□□□□□ -0.28
SND1-203ENST00000463020 ZNF346Q9UL40 294 aaKnown RBP13.3□□□□□ -0.28
SND1-203ENST00000463020 TIPRLO75663 272 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 LCKP06239 509 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 OR8G3PP0DMU2 310 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 HOXB6P17509 224 aaKnown RBP13.29□□□□□ -0.28
SND1-203ENST00000463020 AHCYP23526 432 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 PRKAR1BP31321 381 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 MPV17P39210 176 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 CDH12P55289 794 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 LRRC74AQ0VAA2 488 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 OR1Q1Q15612 314 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 TREML4Q6UXN2 200 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 FKBP9P1Q75LS8 142 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 AMIGO2Q86SJ2 522 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 ADGRG5Q8IZF4 528 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 SCAIQ8N9R8 606 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 DEFB108BQ8NET1 73 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 OR4K5Q8NGD3 323 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 BBS10Q8TAM1 723 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 SYNPRQ8TBG9 265 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 SLC35B4Q969S0 331 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 CENPNQ96H22 339 aaPredicted RBP13.29□□□□□ -0.28
SND1-203ENST00000463020 UNKLQ9H9P5 680 aaKnown RBP13.29□□□□□ -0.28
SND1-203ENST00000463020 B3GAT2Q9NPZ5 323 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 MMP26Q9NRE1 261 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 TMEM38BQ9NVV0 291 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 SLAMF8Q9P0V8 285 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 GMPR2Q9P2T1 348 aaKnown RBP13.29□□□□□ -0.28
SND1-203ENST00000463020 ZNF69Q9UC07 566 aa13.29□□□□□ -0.28
SND1-203ENST00000463020 ZNF726A6NNF4 738 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 J3QLI3 93 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 IGHV1-46P01743 117 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 THY1P04216 161 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 ZNF26P17031 533 aaPredicted RBP13.28□□□□□ -0.28
SND1-203ENST00000463020 RAD52P43351 418 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 RBBP4Q09028 425 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 MIDNQ504T8 468 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 SPATA46Q5T0L3 261 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 INTS11Q5TA45 600 aaKnown RBP13.28□□□□□ -0.28
SND1-203ENST00000463020 GLYATQ6IB77 296 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 ULK3Q6PHR2 472 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 DHRS4L2Q6PKH6 230 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 C5orf46Q6UWT4 87 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 PXKQ7Z7A4 578 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 TSPYL5Q86VY4 417 aaPredicted RBP13.28□□□□□ -0.28
SND1-203ENST00000463020 LRRC17Q8N6Y2 441 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 PAPD5Q8NDF8 572 aaKnown RBP13.28□□□□□ -0.28
SND1-203ENST00000463020 OR6S1Q8NH40 331 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 DNAJA4Q8WW22 397 aaPredicted RBP13.28□□□□□ -0.28
SND1-203ENST00000463020 RAB39BQ96DA2 213 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 ASPNQ9BXN1 380 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 IKZF5Q9H5V7 419 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 ARMC7Q9H6L4 198 aa13.28□□□□□ -0.28
SND1-203ENST00000463020 NKIRAS2Q9NYR9 191 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms