RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 APEX1P27695 318 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 CFPP27918 469 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 SLC9A3P48764 834 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 DAP3P51398 398 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 CHN2P52757 468 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 UBE2NP61088 152 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 MYBPC1Q00872 1141 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 SPIBQ01892 262 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 FMODQ06828 376 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 TOP3AQ13472 1001 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 ALG10Q5BKT4 473 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 FGD3Q5JSP0 725 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 C10orf128Q5T292 105 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 LIPNQ5VXI9 398 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF813Q6ZN06 617 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 FAM122BQ7Z309 247 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 PIWIL3Q7Z3Z3 882 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF786Q8N393 782 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 CLDN22Q8N7P3 220 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 LINC01356Q8N9X3 169 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 SYT14Q8NB59 555 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF540Q8NDQ6 660 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 OR4F15Q8NGB8 312 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 OR4K5Q8NGD3 323 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 OR6N1Q8NGY5 312 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 OR52J3Q8NH60 311 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 OR51A7Q8NH64 312 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 MCHR2Q969V1 340 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 NABP1Q96AH0 204 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 TSPAN32Q96QS1 320 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 KCNS3Q9BQ31 491 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 PLA2G12AQ9BZM1 189 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 RAB1BQ9H0U4 201 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 MUC13Q9H3R2 512 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 B3GAT2Q9NPZ5 323 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 TMEM38BQ9NVV0 291 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 VNN3Q9NY84 501 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 TMEFF2Q9UIK5 374 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 SIGLEC7Q9Y286 467 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 POFUT2Q9Y2G5 429 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 UGT2A1Q9Y4X1 527 aa6.81□□□□□ -1.32
CDC42BPA-210ENST00000462553 A0A1W2PRG6 482 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 IMPA2O14732 288 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 ACOT8O14734 319 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 PTP4A3O75365 173 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 VENTXO95231 258 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 FABP3P05413 133 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 QDPRP09417 244 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 PATE4P0C8F1 98 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 CBR1P16152 277 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF14P17017 642 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 NPR2P20594 1047 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 PAX7P23759 505 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 RRM2P31350 389 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 DVL1P1P54792 670 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 CLRN1P58418 232 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 CTXN1P60606 82 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 RPL27P61353 136 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 SNTB2Q13425 540 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 CCNIQ14094 377 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 TRIM25Q14258 630 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 TAF11Q15544 211 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 ANKDD1AQ495B1 522 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZBED5Q49AG3 693 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 MTX3Q5HYI7 312 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 PGM2L1Q6PCE3 622 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 SLC25A47Q6Q0C1 308 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZER1Q7Z7L7 766 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 OAFQ86UD1 273 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF584Q8IVC4 421 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZDHHC21Q8IVQ6 265 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 OR4C15Q8NGM1 316 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 NEU4Q8WWR8 484 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 CCDC124Q96CT7 223 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 ASB9Q96DX5 294 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 RSRC1Q96IZ7 334 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 GPX7Q96SL4 187 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 TPK1Q9H3S4 243 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF346Q9UL40 294 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 TMEM5Q9Y2B1 443 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 ADAM18Q9Y3Q7 739 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 FAM32AQ9Y421 112 aaKnown RBP6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 LYVE1Q9Y5Y7 322 aa6.8□□□□□ -1.32
CDC42BPA-210ENST00000462553 FAM157AC9JC47 383 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 H7C1C5 153 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 WNT9BO14905 357 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 MGRN1O60291 552 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 GADD45GO95257 159 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 CD14P08571 375 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 MMP7P09237 267 aaPredicted RBP6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 CDAP32320 146 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 SRP14P37108 136 aaKnown RBP6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 GSSP48637 474 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 LCN6P62502 163 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 ERVK-25P63136 954 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 NPRL3Q12980 569 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 NRN1LQ496H8 165 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 MESTQ5EB52 335 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 ELFN2Q5R3F8 820 aa6.79□□□□□ -1.32
CDC42BPA-210ENST00000462553 ZNF770Q6IQ21 691 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms