RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 HIVEP1P15822 2718 aa5.01□□□□□ -1.61
VPS36-202ENST00000462289 FLNAP21333 2647 aaKnown RBP5□□□□□ -1.61
VPS36-202ENST00000462289 IGKV1D-43A0A0B4J1Z2 117 aa5□□□□□ -1.61
VPS36-202ENST00000462289 A1L4Q6 167 aa5□□□□□ -1.61
VPS36-202ENST00000462289 A6NNC1 897 aa5□□□□□ -1.61
VPS36-202ENST00000462289 CYSRT1A8MQ03 144 aa5□□□□□ -1.61
VPS36-202ENST00000462289 ZNF99A8MXY4 864 aaPredicted RBP5□□□□□ -1.61
VPS36-202ENST00000462289 EFCAB9A8MZ26 197 aa5□□□□□ -1.61
VPS36-202ENST00000462289 MCIDASD6RGH6 385 aa5□□□□□ -1.61
VPS36-202ENST00000462289 KPNA4O00629 521 aaPredicted RBP5□□□□□ -1.61
VPS36-202ENST00000462289 CLOCKO15516 846 aa5□□□□□ -1.61
VPS36-202ENST00000462289 IDH3BO43837 385 aa5□□□□□ -1.61
VPS36-202ENST00000462289 NDUFB2O95178 105 aa5□□□□□ -1.61
VPS36-202ENST00000462289 PLGP00747 810 aaPredicted RBP5□□□□□ -1.61
VPS36-202ENST00000462289 ADORA3P0DMS8 318 aa5□□□□□ -1.61
VPS36-202ENST00000462289 POU2F1P14859 743 aa5□□□□□ -1.61
VPS36-202ENST00000462289 PTNP21246 168 aa5□□□□□ -1.61
VPS36-202ENST00000462289 GPR4P46093 362 aa5□□□□□ -1.61
VPS36-202ENST00000462289 DAP3P51398 398 aaKnown RBP5□□□□□ -1.61
VPS36-202ENST00000462289 CLDN17P56750 224 aa5□□□□□ -1.61
VPS36-202ENST00000462289 RPL27P61353 136 aaKnown RBP5□□□□□ -1.61
VPS36-202ENST00000462289 EFNB1P98172 346 aa5□□□□□ -1.61
VPS36-202ENST00000462289 PPP2R2BQ00005 443 aa5□□□□□ -1.61
VPS36-202ENST00000462289 POU3F1Q03052 451 aaPredicted RBP5□□□□□ -1.61
VPS36-202ENST00000462289 LGALS3BPQ08380 585 aa5□□□□□ -1.61
VPS36-202ENST00000462289 COX10Q12887 443 aa5□□□□□ -1.61
VPS36-202ENST00000462289 RIN1Q13671 783 aa5□□□□□ -1.61
VPS36-202ENST00000462289 TAB1Q15750 504 aa5□□□□□ -1.61
VPS36-202ENST00000462289 EXOC3L2Q2M3D2 409 aa5□□□□□ -1.61
VPS36-202ENST00000462289 ALG10Q5BKT4 473 aa5□□□□□ -1.61
VPS36-202ENST00000462289 GPR139Q6DWJ6 353 aa5□□□□□ -1.61
VPS36-202ENST00000462289 OR7E24Q6IFN5 339 aa5□□□□□ -1.61
VPS36-202ENST00000462289 HMBOX1Q6NT76 420 aa5□□□□□ -1.61
VPS36-202ENST00000462289 RPL13AP3Q6NVV1 102 aa5□□□□□ -1.61
VPS36-202ENST00000462289 SHQ1Q6PI26 577 aaKnown RBP5□□□□□ -1.61
VPS36-202ENST00000462289 SLC25A47Q6Q0C1 308 aa5□□□□□ -1.61
VPS36-202ENST00000462289 ZNF730Q6ZMV8 503 aa5□□□□□ -1.61
VPS36-202ENST00000462289 MEX3BQ6ZN04 569 aaKnown RBP5□□□□□ -1.61
VPS36-202ENST00000462289 DPY19L2P2Q6ZN68 376 aa5□□□□□ -1.61
VPS36-202ENST00000462289 CCDC121Q6ZUS5 278 aa5□□□□□ -1.61
VPS36-202ENST00000462289 AAED1Q7RTV5 226 aa5□□□□□ -1.61
VPS36-202ENST00000462289 HDDC2Q7Z4H3 204 aa5□□□□□ -1.61
VPS36-202ENST00000462289 LUZP2Q86TE4 346 aa5□□□□□ -1.61
VPS36-202ENST00000462289 OAFQ86UD1 273 aa5□□□□□ -1.61
VPS36-202ENST00000462289 CXorf67Q86X51 503 aaPredicted RBP5□□□□□ -1.61
VPS36-202ENST00000462289 LDLRAD3Q86YD5 345 aa5□□□□□ -1.61
VPS36-202ENST00000462289 UEVLDQ8IX04 471 aa5□□□□□ -1.61
VPS36-202ENST00000462289 LNX2Q8N448 690 aa5□□□□□ -1.61
VPS36-202ENST00000462289 NOXO1Q8NFA2 376 aa5□□□□□ -1.61
VPS36-202ENST00000462289 OR9Q2Q8NGE9 314 aa5□□□□□ -1.61
VPS36-202ENST00000462289 OR1K1Q8NGR3 316 aa5□□□□□ -1.61
VPS36-202ENST00000462289 OR13C2Q8NGS9 318 aa5□□□□□ -1.61
VPS36-202ENST00000462289 FNDC8Q8TC99 324 aa5□□□□□ -1.61
VPS36-202ENST00000462289 DNAJC9Q8WXX5 260 aa5□□□□□ -1.61
VPS36-202ENST00000462289 HSD17B8Q92506 261 aa5□□□□□ -1.61
VPS36-202ENST00000462289 HDAC2Q92769 488 aaKnown RBP5□□□□□ -1.61
VPS36-202ENST00000462289 NABP1Q96AH0 204 aa5□□□□□ -1.61
VPS36-202ENST00000462289 MCUR1Q96AQ8 359 aa5□□□□□ -1.61
VPS36-202ENST00000462289 S100PBPQ96BU1 408 aa5□□□□□ -1.61
VPS36-202ENST00000462289 SLC25A36Q96CQ1 311 aa5□□□□□ -1.61
VPS36-202ENST00000462289 FOXRED1Q96CU9 486 aaPredicted RBP5□□□□□ -1.61
VPS36-202ENST00000462289 DNAJA3Q96EY1 480 aa5□□□□□ -1.61
VPS36-202ENST00000462289 LRRC46Q96FV0 321 aa5□□□□□ -1.61
VPS36-202ENST00000462289 RSRC1Q96IZ7 334 aaKnown RBP5□□□□□ -1.61
VPS36-202ENST00000462289 TNFRSF13CQ96RJ3 184 aa5□□□□□ -1.61
VPS36-202ENST00000462289 FOXB1Q99853 325 aa5□□□□□ -1.61
VPS36-202ENST00000462289 OSBPL10Q9BXB5 764 aa5□□□□□ -1.61
VPS36-202ENST00000462289 NMNAT2Q9BZQ4 307 aa5□□□□□ -1.61
VPS36-202ENST00000462289 DENND2DQ9H6A0 471 aaPredicted RBP5□□□□□ -1.61
VPS36-202ENST00000462289 PLEKHF2Q9H8W4 249 aa5□□□□□ -1.61
VPS36-202ENST00000462289 GPR35Q9HC97 309 aa5□□□□□ -1.61
VPS36-202ENST00000462289 SLC17A5Q9NRA2 495 aa5□□□□□ -1.61
VPS36-202ENST00000462289 INIPQ9NRY2 104 aa5□□□□□ -1.61
VPS36-202ENST00000462289 RASSF1Q9NS23 344 aa5□□□□□ -1.61
VPS36-202ENST00000462289 NPAP1Q9NZP6 1156 aa5□□□□□ -1.61
VPS36-202ENST00000462289 STX18Q9P2W9 335 aaKnown RBP5□□□□□ -1.61
VPS36-202ENST00000462289 CDH10Q9Y6N8 788 aa5□□□□□ -1.61
VPS36-202ENST00000462289 V9GYQ6 96 aa5□□□□□ -1.61
VPS36-202ENST00000462289 ZANQ9Y493 2812 aa5□□□□□ -1.61
VPS36-202ENST00000462289 ACANP16112 2415 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 YLPM1P49750 1951 aaKnown RBP4.99□□□□□ -1.61
VPS36-202ENST00000462289 TRAV27A0A087WT01 109 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 TUBAL3A6NHL2 446 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 TNFRSF11BO00300 401 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 SLC43A1O75387 559 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 TRMUO75648 421 aaKnown RBP4.99□□□□□ -1.61
VPS36-202ENST00000462289 CST1P01037 141 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 GASTP01350 101 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 IGHG1P01857 330 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 MMP7P09237 267 aaPredicted RBP4.99□□□□□ -1.61
VPS36-202ENST00000462289 NQO1P15559 274 aaKnown RBP4.99□□□□□ -1.61
VPS36-202ENST00000462289 PAX1P15863 534 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 ACADSP16219 412 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 GTF2E2P29084 291 aaKnown RBP4.99□□□□□ -1.61
VPS36-202ENST00000462289 SSTR2P30874 369 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 IFNGR2P38484 337 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 KIR2DL3P43628 341 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 IST1P53990 364 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 BIDP55957 195 aa4.99□□□□□ -1.61
VPS36-202ENST00000462289 MRPS34P82930 218 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms