RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 THBS2P35442 1172 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 RAP1BP61224 184 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 PSME3P61289 254 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 RAP1AP62834 184 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 MRPS11P82912 194 aaKnown RBP16.21■□□□□ 0.19
VARS-220ENST00000461874 PSG4Q00888 419 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 ALKBH6Q3KRA9 238 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 FOXL2NBQ6ZUU3 175 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 IL17RELQ6ZVW7 336 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 TMPRSS11FQ6ZWK6 438 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 FAM156AQ8NDB6 213 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 FAM162AQ96A26 154 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 CMTM5Q96DZ9 223 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 POM121L2Q96KW2 1035 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 ANKRD19PQ9H560 264 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 NMNAT1Q9HAN9 279 aaPredicted RBP16.21■□□□□ 0.19
VARS-220ENST00000461874 HINT3Q9NQE9 182 aaKnown RBP16.21■□□□□ 0.19
VARS-220ENST00000461874 SLCO1C1Q9NYB5 712 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 ENPP4Q9Y6X5 453 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 LOC100509620A0A075B734 347 aa16.2■□□□□ 0.18
VARS-220ENST00000461874 C17orf100A8MU93 164 aa16.2■□□□□ 0.18
VARS-220ENST00000461874 CDC42EP2O14613 210 aa16.2■□□□□ 0.18
VARS-220ENST00000461874 PHF1O43189 567 aaPredicted RBP16.2■□□□□ 0.18
VARS-220ENST00000461874 CCNOP22674 350 aa16.2■□□□□ 0.18
VARS-220ENST00000461874 LAP3P28838 519 aa16.2■□□□□ 0.18
VARS-220ENST00000461874 GPR4P46093 362 aa16.2■□□□□ 0.18
VARS-220ENST00000461874 GPR6P46095 362 aaPredicted RBP16.2■□□□□ 0.18
VARS-220ENST00000461874 TMEM33P57088 247 aa16.2■□□□□ 0.18
VARS-220ENST00000461874 ERVK-25P63136 954 aa16.2■□□□□ 0.18
VARS-220ENST00000461874 UGT2A3Q6UWM9 527 aa16.2■□□□□ 0.18
VARS-220ENST00000461874 CYP4Z1Q86W10 505 aa16.2■□□□□ 0.18
VARS-220ENST00000461874 LINC01356Q8N9X3 169 aa16.2■□□□□ 0.18
VARS-220ENST00000461874 ICA1LQ8NDH6 482 aa16.2■□□□□ 0.18
VARS-220ENST00000461874 AKR7LQ8NHP1 331 aa16.2■□□□□ 0.18
VARS-220ENST00000461874 TMEM158Q8WZ71 300 aa16.2■□□□□ 0.18
VARS-220ENST00000461874 YIPF5Q969M3 257 aa16.2■□□□□ 0.18
VARS-220ENST00000461874 ATP8B1O43520 1251 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 CST2P09228 141 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 ZNF26P17031 533 aaPredicted RBP16.19■□□□□ 0.18
VARS-220ENST00000461874 HNF1AP20823 631 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 PRDX6P30041 224 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 WNT5AP41221 380 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 GUCA1AP43080 201 aaPredicted RBP16.19■□□□□ 0.18
VARS-220ENST00000461874 MAGEB1P43366 347 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 GDI2P50395 445 aaKnown RBP16.19■□□□□ 0.18
VARS-220ENST00000461874 CDH15P55291 814 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 MOGQ16653 247 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 CR1LQ2VPA4 569 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 ZBED5Q49AG3 693 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 TMEM154Q6P9G4 183 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 RRM2BQ7LG56 351 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 OR1J1Q8NGS3 322 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 SLC7A13Q8TCU3 470 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 SNX33Q8WV41 574 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 OR2H1Q9GZK4 316 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 RACGAP1Q9H0H5 632 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 WNT5BQ9H1J7 359 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 ZNF275Q9NSD4 429 aaPredicted RBP16.19■□□□□ 0.18
VARS-220ENST00000461874 EIF3KQ9UBQ5 218 aaKnown RBP16.19■□□□□ 0.18
VARS-220ENST00000461874 RPS6KA6Q9UK32 745 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 TIMM10BQ9Y5J6 103 aa16.19■□□□□ 0.18
VARS-220ENST00000461874 A0A1W2PRQ8 180 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 C5orf49A4QMS7 147 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 RP2O75695 350 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 IGHV3-13P01766 116 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 CD14P08571 375 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 RPL4P36578 427 aaKnown RBP16.18■□□□□ 0.18
VARS-220ENST00000461874 PCBD1P61457 104 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 CCNIQ14094 377 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 DGCR6Q14129 220 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 PCGF3Q3KNV8 242 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 ALDH16A1Q8IZ83 802 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 ZNF101Q8IZC7 436 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 ZNF416Q9BWM5 594 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 SPAG4Q9NPE6 437 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 NKIRAS2Q9NYR9 191 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 NDUFAF4Q9P032 175 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 GRHPRQ9UBQ7 328 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 EGFL7Q9UHF1 273 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 TMEM5Q9Y2B1 443 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 ADAM18Q9Y3Q7 739 aa16.18■□□□□ 0.18
VARS-220ENST00000461874 A0A1W2PPL8 197 aa16.17■□□□□ 0.18
VARS-220ENST00000461874 H7C1C5 153 aa16.17■□□□□ 0.18
VARS-220ENST00000461874 PTP4A3O75365 173 aa16.17■□□□□ 0.18
VARS-220ENST00000461874 H1F0P07305 194 aaKnown RBP16.17■□□□□ 0.18
VARS-220ENST00000461874 MSR1P21757 451 aa16.17■□□□□ 0.18
VARS-220ENST00000461874 DRD4P21917 467 aa16.17■□□□□ 0.18
VARS-220ENST00000461874 LCN6P62502 163 aa16.17■□□□□ 0.18
VARS-220ENST00000461874 CCL8P80075 99 aa16.17■□□□□ 0.18
VARS-220ENST00000461874 ENDOGQ14249 297 aaKnown RBP16.17■□□□□ 0.18
VARS-220ENST00000461874 GLYATQ6IB77 296 aa16.17■□□□□ 0.18
VARS-220ENST00000461874 UNQ6126/PRO20091Q6UXV3 157 aa16.17■□□□□ 0.18
VARS-220ENST00000461874 PHC2Q8IXK0 858 aa16.17■□□□□ 0.18
VARS-220ENST00000461874 CLDND2Q8NHS1 167 aa16.17■□□□□ 0.18
VARS-220ENST00000461874 MARS2Q96GW9 593 aaKnown RBP16.17■□□□□ 0.18
VARS-220ENST00000461874 C7orf34Q96L11 122 aa16.17■□□□□ 0.18
VARS-220ENST00000461874 Q96M85 177 aa16.17■□□□□ 0.18
VARS-220ENST00000461874 POLE4Q9NR33 117 aa16.17■□□□□ 0.18
VARS-220ENST00000461874 DCAF13Q9NV06 445 aaKnown RBP16.17■□□□□ 0.18
VARS-220ENST00000461874 FAM32AQ9Y421 112 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms