RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 PGBD2Q6P3X8 592 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 DPY19L2P2Q6ZN68 376 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 FAM122BQ7Z309 247 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 DPPA2Q7Z7J5 298 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 SPATA24Q86W54 205 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 ZCCHC24Q8N2G6 241 aaKnown RBP16.13■□□□□ 0.17
USP39-209ENST00000458268 RHNO1Q9BSD3 238 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 C1orf21Q9H246 121 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 LRMDAQ9H2I8 198 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 TPK1Q9H3S4 243 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 ZNF442Q9H7R0 627 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 REEP1Q9H902 201 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 NRIP3Q9NQ35 241 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 DUSP13Q9UII6 198 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 SAMHD1Q9Y3Z3 626 aaKnown RBP16.13■□□□□ 0.17
USP39-209ENST00000458268 LYVE1Q9Y5Y7 322 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 FKBP7Q9Y680 259 aa16.13■□□□□ 0.17
USP39-209ENST00000458268 VPS13CQ709C8 3753 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 A0A1W2PPW3 197 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 KRT36O76013 467 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 PTHP01270 115 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 ZNF35P13682 527 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 CTLA4P16410 223 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 MSR1P21757 451 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 FPR3P25089 353 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 RPS23P62266 143 aaKnown RBP16.12■□□□□ 0.17
USP39-209ENST00000458268 DBPQ10586 325 aaPredicted RBP16.12■□□□□ 0.17
USP39-209ENST00000458268 FLOT2Q14254 428 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 ALKBH6Q3KRA9 238 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 LEG1Q6P5S2 330 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 UGT2A3Q6UWM9 527 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 PTCHD4Q6ZW05 846 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 OR1J2Q8NGS2 313 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 MRPL37Q9BZE1 423 aaKnown RBP16.12■□□□□ 0.17
USP39-209ENST00000458268 MAGIXQ9H6Y5 334 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 EGLN3Q9H6Z9 239 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 VNN3Q9NY84 501 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 SLC7A8Q9UHI5 535 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 COA3Q9Y2R0 106 aaPredicted RBP16.12■□□□□ 0.17
USP39-209ENST00000458268 POLR1DQ9Y2S0 133 aa16.12■□□□□ 0.17
USP39-209ENST00000458268 IGHV4-30-2A0A087WSY4 118 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 C5orf49A4QMS7 147 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 GNGT2O14610 69 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 LY6G6DO95868 133 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 GPANK1O95872 356 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 ADRA2AP08913 450 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 MMP7P09237 267 aaPredicted RBP16.11■□□□□ 0.17
USP39-209ENST00000458268 GDI2P50395 445 aaKnown RBP16.11■□□□□ 0.17
USP39-209ENST00000458268 EFNA4P52798 201 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 ERVS71-1P61550 626 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 MAD2L1BPQ15013 274 aaPredicted RBP16.11■□□□□ 0.17
USP39-209ENST00000458268 MSMPQ1L6U9 139 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 RFX4Q33E94 735 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 NRN1LQ496H8 165 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 SLC35F1Q5T1Q4 408 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 OR2T5Q6IEZ7 315 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 RGS7BPQ6MZT1 257 aaPredicted RBP16.11■□□□□ 0.17
USP39-209ENST00000458268 ZNF774Q6NX45 483 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 LRP11Q86VZ4 500 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 OR52L1Q8NGH7 329 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 OR2T29Q8NH02 315 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 OR4K13Q8NH42 304 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 TSSK2Q96PF2 358 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 BTBD10Q9BSF8 475 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 ZNF416Q9BWM5 594 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 REG4Q9BYZ8 158 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 C1orf198Q9H425 327 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 FN3KQ9H479 309 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 POLE4Q9NR33 117 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 ZNF469Q96JG9 3925 aaPredicted RBP16.11■□□□□ 0.17
USP39-209ENST00000458268 CR1P17927 2039 aa16.11■□□□□ 0.17
USP39-209ENST00000458268 MGRN1O60291 552 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 KHDRBS3O75525 346 aaKnown RBP16.1■□□□□ 0.17
USP39-209ENST00000458268 RENP00797 406 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 SCG5P05408 212 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 CST2P09228 141 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 STOMP27105 288 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 CDKN2AP42771 156 aaKnown RBP16.1■□□□□ 0.17
USP39-209ENST00000458268 ALDH3B1P43353 468 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 MAGEA2P43356 314 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 PSG4Q00888 419 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 GLO1Q04760 184 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 TSPAN31Q12999 210 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 EFNB3Q15768 340 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 SPATA46Q5T0L3 261 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 FAM27BQ5VT28 67 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 ADCK1Q86TW2 530 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 AQP11Q8NBQ7 271 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 CPEB3Q8NE35 698 aaKnown RBP16.1■□□□□ 0.17
USP39-209ENST00000458268 SDR9C7Q8NEX9 313 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 FAM168AQ92567 244 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 MRPL24Q96A35 216 aaKnown RBP16.1■□□□□ 0.17
USP39-209ENST00000458268 GPX7Q96SL4 187 aaPredicted RBP16.1■□□□□ 0.17
USP39-209ENST00000458268 OR2H1Q9GZK4 316 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 NUAK2Q9H093 628 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 RAB1BQ9H0U4 201 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 SRA1Q9HD15 236 aaKnown RBP16.1■□□□□ 0.17
USP39-209ENST00000458268 TBC1D23Q9NUY8 699 aa16.1■□□□□ 0.17
USP39-209ENST00000458268 MTORP42345 2549 aa16.09■□□□□ 0.17
USP39-209ENST00000458268 DHRS12A0PJE2 317 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms