RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 GPR119Q8TDV5 335 aa17.66■□□□□ 0.42
CNEP1R1-203ENST00000458059 SLC25A28Q96A46 364 aa17.66■□□□□ 0.42
CNEP1R1-203ENST00000458059 ZNF75AQ96N20 296 aa17.66■□□□□ 0.42
CNEP1R1-203ENST00000458059 PDCD10Q9BUL8 212 aa17.66■□□□□ 0.42
CNEP1R1-203ENST00000458059 PIAS3Q9Y6X2 628 aa17.66■□□□□ 0.42
CNEP1R1-203ENST00000458059 LOC101059948A0A1B0GTJ6 334 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 SOX1O00570 391 aaPredicted RBP17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 POU2F2P09086 479 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 ACKR1Q16570 336 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 C16orf47Q6ZP98 133 aaPredicted RBP17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 SLC43A2Q8N370 569 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 ZSCAN1Q8NBB4 408 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 PHOSPHO2Q8TCD6 241 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 GPBAR1Q8TDU6 330 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 CYYR1Q96J86 154 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 GPX7Q96SL4 187 aaPredicted RBP17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 DHDHQ9UQ10 334 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 PLEKHA6Q9Y2H5 1048 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 TRBV5-7A0A0A0MS05 114 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 NR0B2Q15466 257 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 CORO6Q6QEF8 472 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 RTN4RL2Q86UN3 420 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 OR6N1Q8NGY5 312 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 OTOSQ8NHW6 89 aa17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 MRPS18BQ9Y676 258 aaKnown RBP17.65■□□□□ 0.42
CNEP1R1-203ENST00000458059 TMEM82A0PJX8 343 aa17.64■□□□□ 0.42
CNEP1R1-203ENST00000458059 TNFRSF10CO14798 259 aa17.64■□□□□ 0.42
CNEP1R1-203ENST00000458059 NR0B1P51843 470 aaKnown RBP17.64■□□□□ 0.42
CNEP1R1-203ENST00000458059 EPHA4P54764 986 aa17.64■□□□□ 0.42
CNEP1R1-203ENST00000458059 FUT7Q11130 342 aa17.64■□□□□ 0.42
CNEP1R1-203ENST00000458059 EEF1A1P5Q5VTE0 462 aa17.64■□□□□ 0.42
CNEP1R1-203ENST00000458059 ZNF546Q86UE3 836 aa17.64■□□□□ 0.42
CNEP1R1-203ENST00000458059 PDZD9Q8IXQ8 264 aa17.64■□□□□ 0.42
CNEP1R1-203ENST00000458059 STEAP2Q8NFT2 490 aa17.64■□□□□ 0.42
CNEP1R1-203ENST00000458059 SLC25A44Q96H78 314 aaPredicted RBP17.64■□□□□ 0.42
CNEP1R1-203ENST00000458059 WDR13Q9H1Z4 485 aa17.64■□□□□ 0.42
CNEP1R1-203ENST00000458059 ZNF275Q9NSD4 429 aaPredicted RBP17.64■□□□□ 0.42
CNEP1R1-203ENST00000458059 EMC9Q9Y3B6 208 aa17.64■□□□□ 0.42
CNEP1R1-203ENST00000458059 NOP16Q9Y3C1 178 aaKnown RBP17.64■□□□□ 0.42
CNEP1R1-203ENST00000458059 CLPSP04118 112 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 OR4E1P0C645 316 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 HLA-DOBP13765 273 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 GABRG2P18507 467 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 IL11P20809 199 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 DHODHQ02127 395 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 EIF2B1Q14232 305 aaKnown RBP17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 TMEM151BQ8IW70 566 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 BEST3Q8N1M1 668 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 CASTOR1Q8WTX7 329 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 FAM131CQ96AQ9 280 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 H0YIG0 161 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 SDC3O75056 442 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 SLC25A12O75746 678 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 CSRP1P21291 193 aaKnown RBP17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 GMFBP60983 142 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 FMODQ06828 376 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 IKZF1Q13422 519 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 SLC17A1Q14916 467 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 PRTGQ2VWP7 1150 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 MANEAQ5SRI9 462 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 RHOUQ7L0Q8 258 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 CLEC1AQ8NC01 280 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 MCHR2Q969V1 340 aa17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 MRPL22Q9NWU5 206 aaKnown RBP17.64■□□□□ 0.41
CNEP1R1-203ENST00000458059 LOC100289279A0A1B0GTE1 492 aa17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 PCP4L1A6NKN8 68 aa17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 LDOC1O95751 146 aaPredicted RBP17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 CD1CP29017 333 aa17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 OR52W1Q6IF63 320 aa17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 ARHGEF39Q8N4T4 335 aa17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 GVQW1Q8N7I0 195 aa17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 PTPMT1Q8WUK0 201 aaPredicted RBP17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 CENPMQ9NSP4 180 aa17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 MRTO4Q9UKD2 239 aaKnown RBP17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 LUMP51884 338 aaPredicted RBP17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 FZD2Q14332 565 aa17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 TMEM225Q6GV28 225 aa17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 C12orf45Q8N5I9 185 aaPredicted RBP17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 CHST4Q8NCG5 386 aa17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 THAP3Q8WTV1 239 aaPredicted RBP17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 SEH1LQ96EE3 360 aa17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 GMEB2Q9UKD1 530 aa17.63■□□□□ 0.41
CNEP1R1-203ENST00000458059 TRAV14DV4A0A0A6YYC5 116 aa17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 IGHV5-51A0A0C4DH38 117 aa17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 INSM1Q01101 510 aaPredicted RBP17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 RASGEF1BQ0VAM2 473 aa17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 BVESQ8NE79 360 aa17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 OR10K1Q8NGX5 313 aa17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 OR8B4Q96RC9 309 aa17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 SLC19A3Q9BZV2 496 aa17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 COA3Q9Y2R0 106 aaPredicted RBP17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 SRPX2O60687 465 aaPredicted RBP17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 B3GALNT1O75752 331 aa17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 IGHV4-34P06331 123 aa17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 HOXC4P09017 264 aaPredicted RBP17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 SKP1P63208 163 aa17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 HDDC2Q7Z4H3 204 aa17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 TOE1Q96GM8 510 aaKnown RBP17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 NPAS1Q99742 590 aa17.62■□□□□ 0.41
CNEP1R1-203ENST00000458059 THADAQ6YHU6 1953 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms