RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 IL20RAQ9UHF4 553 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 SIGLEC7Q9Y286 467 aa13.96□□□□□ -0.18
CPSF6-203ENST00000456847 NF1P21359 2839 aa13.95□□□□□ -0.18
CPSF6-203ENST00000456847 HIVEP2P31629 2446 aa13.95□□□□□ -0.18
CPSF6-203ENST00000456847 TLX2O43763 284 aaPredicted RBP13.95□□□□□ -0.18
CPSF6-203ENST00000456847 SNAP29O95721 258 aa13.95□□□□□ -0.18
CPSF6-203ENST00000456847 CST2P09228 141 aa13.95□□□□□ -0.18
CPSF6-203ENST00000456847 ZNF26P17031 533 aaPredicted RBP13.95□□□□□ -0.18
CPSF6-203ENST00000456847 MSR1P21757 451 aa13.95□□□□□ -0.18
CPSF6-203ENST00000456847 STOMP27105 288 aa13.95□□□□□ -0.18
CPSF6-203ENST00000456847 SELENOVP59797 346 aa13.95□□□□□ -0.18
CPSF6-203ENST00000456847 MAD2L1BPQ15013 274 aaPredicted RBP13.95□□□□□ -0.18
CPSF6-203ENST00000456847 IQCCQ4KMZ1 466 aa13.95□□□□□ -0.18
CPSF6-203ENST00000456847 FAM27BQ5VT28 67 aa13.95□□□□□ -0.18
CPSF6-203ENST00000456847 CYP2R1Q6VVX0 501 aa13.95□□□□□ -0.18
CPSF6-203ENST00000456847 FANK1Q8TC84 345 aa13.95□□□□□ -0.18
CPSF6-203ENST00000456847 RERGLQ9H628 205 aa13.95□□□□□ -0.18
CPSF6-203ENST00000456847 TMCC3Q9ULS5 477 aa13.95□□□□□ -0.18
CPSF6-203ENST00000456847 FN1P02751 2386 aaKnown RBP13.95□□□□□ -0.18
CPSF6-203ENST00000456847 ZFHX3Q15911 3703 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 CSPG4Q6UVK1 2322 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 OR10H3O60404 316 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 SDHAP31040 664 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 RRM2P31350 389 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 RAD52P43351 418 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 NR4A2P43354 598 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 GDI2P50395 445 aaKnown RBP13.94□□□□□ -0.18
CPSF6-203ENST00000456847 PCBD1P61457 104 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 NKPD1Q17RQ9 610 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 ALKBH6Q3KRA9 238 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 GPR139Q6DWJ6 353 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 FOXL2NBQ6ZUU3 175 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 FAM122BQ7Z309 247 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 ZDHHC21Q8IVQ6 265 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 CPEB3Q8NE35 698 aaKnown RBP13.94□□□□□ -0.18
CPSF6-203ENST00000456847 FOXN4Q96NZ1 517 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 BCL2L14Q9BZR8 327 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 MS4A5Q9H3V2 200 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 MYEF2Q9P2K5 600 aaKnown RBP13.94□□□□□ -0.18
CPSF6-203ENST00000456847 ADAM21Q9UKJ8 722 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 NSD1Q96L73 2696 aaPredicted RBP13.94□□□□□ -0.18
CPSF6-203ENST00000456847 PRSS37A4D1T9 235 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 C12orf71A8MTZ7 269 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 SOCS2O14508 198 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 RPS6KA3P51812 740 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 KLF3P57682 345 aaPredicted RBP13.94□□□□□ -0.18
CPSF6-203ENST00000456847 ERVS71-1P61550 626 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 PSG4Q00888 419 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 THSD4Q6ZMP0 1018 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 ALDH16A1Q8IZ83 802 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 OR1J1Q8NGS3 322 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 SYNPRQ8TBG9 265 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 UBASH3BQ8TF42 649 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 SNX33Q8WV41 574 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 C11orf40Q8WZ69 217 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 GPX7Q96SL4 187 aaPredicted RBP13.94□□□□□ -0.18
CPSF6-203ENST00000456847 OR2H1Q9GZK4 316 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 POLE4Q9NR33 117 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 EIF3KQ9UBQ5 218 aaKnown RBP13.94□□□□□ -0.18
CPSF6-203ENST00000456847 GPR160Q9UJ42 338 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 IER3IP1Q9Y5U9 82 aa13.94□□□□□ -0.18
CPSF6-203ENST00000456847 YLPM1P49750 1951 aaKnown RBP13.94□□□□□ -0.18
CPSF6-203ENST00000456847 TLN2Q9Y4G6 2542 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 C5orf49A4QMS7 147 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 VWC2LB2RUY7 222 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 AHCYL1O43865 530 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 PTP4A3O75365 173 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 STAMBPO95630 424 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 ATP6V1B2P21281 511 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 CALB2P22676 271 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 IFNGR2P38484 337 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 UCP2P55851 309 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 SMARCD3Q6STE5 483 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 DPY19L2P2Q6ZN68 376 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 ZNF540Q8NDQ6 660 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 FUZQ9BT04 418 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 ZNF416Q9BWM5 594 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 BPESC1Q9GZL8 116 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 EMC7Q9NPA0 242 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 IL1RAPQ9NPH3 570 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 NRIP3Q9NQ35 241 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 TAAR3PQ9P1P4 343 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 ACTR3BQ9P1U1 418 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 TIMM10BQ9Y5J6 103 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 ABCA1O95477 2261 aa13.93□□□□□ -0.18
CPSF6-203ENST00000456847 A8MV72 311 aaPredicted RBP13.92□□□□□ -0.18
CPSF6-203ENST00000456847 PPP1R3DO95685 299 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 IGFBP1P08833 259 aaPredicted RBP13.92□□□□□ -0.18
CPSF6-203ENST00000456847 APEHP13798 732 aaKnown RBP13.92□□□□□ -0.18
CPSF6-203ENST00000456847 ZNF16P17020 682 aaPredicted RBP13.92□□□□□ -0.18
CPSF6-203ENST00000456847 ENDOGQ14249 297 aaKnown RBP13.92□□□□□ -0.18
CPSF6-203ENST00000456847 MTX3Q5HYI7 312 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 C6orf52Q5T4I8 152 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 UNQ6126/PRO20091Q6UXV3 157 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 RINLQ6ZS11 566 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 ADCK1Q86TW2 530 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 ARHGAP24Q8N264 748 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 WNT5BQ9H1J7 359 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 SYT4Q9H2B2 425 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 SLC16A7O60669 478 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms