RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 LMF2Q9BU23 707 aaKnown RBP12.4□□□□□ -0.42
PTPRE-204ENST00000455661 TMEM231Q9H6L2 316 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 ZDHHC4Q9NPG8 344 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 GTF2A1LQ9UNN4 478 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 DHDHQ9UQ10 334 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 SLC17A4Q9Y2C5 497 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 HIF3AQ9Y2N7 669 aa12.4□□□□□ -0.42
PTPRE-204ENST00000455661 TEX13DA0A0J9YY54 714 aaPredicted RBP12.39□□□□□ -0.43
PTPRE-204ENST00000455661 MEX3AA1L020 520 aaKnown RBP12.39□□□□□ -0.43
PTPRE-204ENST00000455661 C5orf51A6NDU8 294 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 PRR19A6NJB7 356 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 ZNF705EA8MWA4 302 aaPredicted RBP12.39□□□□□ -0.43
PTPRE-204ENST00000455661 CTSVO60911 334 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 IL2RAP01589 272 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 ACAA1P09110 424 aaPredicted RBP12.39□□□□□ -0.43
PTPRE-204ENST00000455661 AVPR2P30518 371 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 DRD3P35462 400 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 PPICP45877 212 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 DMWDQ09019 674 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 PMPCAQ10713 525 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 SGCGQ13326 291 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 OR7A5Q15622 319 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 HYAL4Q2M3T9 481 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 CDNFQ49AH0 187 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 CD163Q86VB7 1156 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 SFTPA1Q8IWL2 248 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 ZDHHC22Q8N966 263 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 RCBTB1Q8NDN9 531 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 HOXB13Q92826 284 aaPredicted RBP12.39□□□□□ -0.43
PTPRE-204ENST00000455661 TCEAL3Q969E4 200 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 RERGQ96A58 199 aaPredicted RBP12.39□□□□□ -0.43
PTPRE-204ENST00000455661 C3orf49Q96BT1 292 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 SEMA6CQ9H3T2 930 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 CHMP1AQ9HD42 196 aaPredicted RBP12.39□□□□□ -0.43
PTPRE-204ENST00000455661 OR2W5A6NFC9 320 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 LINC00587B1AMM8 73 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 DCTN6O00399 190 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 CYR61O00622 381 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 F13BP05160 661 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 CD2P06729 351 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 CEBPBP17676 345 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 PTGFRP43088 359 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 SNRPEP62304 92 aaKnown RBP12.39□□□□□ -0.43
PTPRE-204ENST00000455661 GPR18Q14330 331 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 SMCO1Q147U7 214 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 PNLIPRP3Q17RR3 467 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 EMC4Q5J8M3 183 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 GLYATL3Q5SZD4 288 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 AGBL4Q5VU57 503 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 RHOUQ7L0Q8 258 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 GRASPQ7Z6J2 395 aaPredicted RBP12.39□□□□□ -0.43
PTPRE-204ENST00000455661 ELP5Q8TE02 316 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 CASTOR1Q8WTX7 329 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 ZNF251Q9BRH9 671 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 G6PC3Q9BUM1 346 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 CST11Q9H112 138 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 ELOVL3Q9HB03 270 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 SLC22A11Q9NSA0 550 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 SLC2A8Q9NY64 477 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 CSAG2Q9Y5P2 127 aa12.39□□□□□ -0.43
PTPRE-204ENST00000455661 LOC100509620A0A075B734 347 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 C13orf42A0A1B0GVH6 325 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 H7C1C5 153 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 FARS2O95363 451 aaKnown RBP12.38□□□□□ -0.43
PTPRE-204ENST00000455661 S100A6P06703 90 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 VAMP1P23763 118 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 NFYBP25208 207 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 RPS27P42677 84 aaKnown RBP12.38□□□□□ -0.43
PTPRE-204ENST00000455661 PGDP52209 483 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 LCN6P62502 163 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 KIR2DS3Q14952 304 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 SMAD2Q15796 467 aaKnown RBP12.38□□□□□ -0.43
PTPRE-204ENST00000455661 ZNF74Q16587 644 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 FAM209BQ5JX69 171 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 TMEM225Q6GV28 225 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 FAM109BQ6ICB4 259 aaPredicted RBP12.38□□□□□ -0.43
PTPRE-204ENST00000455661 FAHD2BQ6P2I3 314 aaPredicted RBP12.38□□□□□ -0.43
PTPRE-204ENST00000455661 FDX2Q6P4F2 183 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 ADGRE4PQ86SQ3 457 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 OR5T3Q8NGG3 340 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 OR4A4PQ8NGN8 299 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 TMED6Q8WW62 240 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 FAHD2AQ96GK7 314 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 CCNL2Q96S94 520 aaPredicted RBP12.38□□□□□ -0.43
PTPRE-204ENST00000455661 CDC6Q99741 560 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 SELENOIQ9C0D9 397 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 ZMAT3Q9HA38 289 aaKnown RBP12.38□□□□□ -0.43
PTPRE-204ENST00000455661 KLK13Q9UKR3 277 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 MRPS2Q9Y399 296 aaKnown RBP12.38□□□□□ -0.43
PTPRE-204ENST00000455661 NUP210LQ5VU65 1888 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 A0A0B4J2A0 478 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 SERINC4A6NH21 518 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 C1orf196B1AJZ1 125 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 DOK2O60496 412 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 TXNDC12O95881 172 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 CRHP06850 196 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 SLC35E2P0CK97 266 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 PNMTP11086 282 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 FOLR2P14207 255 aa12.38□□□□□ -0.43
PTPRE-204ENST00000455661 ARRB1P49407 418 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms