RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 OR9I1Q8NGQ6 314 aa19.5■□□□□ 0.71
PTPRA-208ENST00000455631 AKR7LQ8NHP1 331 aa19.5■□□□□ 0.71
PTPRA-208ENST00000455631 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.5■□□□□ 0.711e-6■■■■■ 42.4
PTPRA-208ENST00000455631 C1RLQ9NZP8 487 aa19.5■□□□□ 0.71
PTPRA-208ENST00000455631 ZIM2Q9NZV7 527 aa19.5■□□□□ 0.71
PTPRA-208ENST00000455631 LRCH1Q9Y2L9 728 aa19.5■□□□□ 0.71
PTPRA-208ENST00000455631 PRORSD1PA6NEY8 169 aa19.49■□□□□ 0.71
PTPRA-208ENST00000455631 TRPC5OSA6NMA1 111 aa19.49■□□□□ 0.71
PTPRA-208ENST00000455631 SRRM5B3KS81 715 aa19.49■□□□□ 0.71
PTPRA-208ENST00000455631 KPNA4O00629 521 aaPredicted RBP19.49■□□□□ 0.71
PTPRA-208ENST00000455631 NGFP01138 241 aa19.49■□□□□ 0.71
PTPRA-208ENST00000455631 POLR2JP52435 117 aaKnown RBP19.49■□□□□ 0.71
PTPRA-208ENST00000455631 RELBQ01201 579 aa19.49■□□□□ 0.71
PTPRA-208ENST00000455631 HIST3H3Q16695 136 aa19.49■□□□□ 0.71
PTPRA-208ENST00000455631 SLC2A7Q6PXP3 512 aa19.49■□□□□ 0.71
PTPRA-208ENST00000455631 LRRN1Q6UXK5 716 aa19.49■□□□□ 0.71
PTPRA-208ENST00000455631 BRD3OSQ6XYD6 125 aa19.49■□□□□ 0.71
PTPRA-208ENST00000455631 GTF2H4Q92759 462 aa19.49■□□□□ 0.71
PTPRA-208ENST00000455631 SSBP3Q9BWW4 388 aaPredicted RBP19.49■□□□□ 0.71
PTPRA-208ENST00000455631 MARCH7Q9H992 704 aa19.49■□□□□ 0.71
PTPRA-208ENST00000455631 KLHL21Q9UJP4 597 aa19.49■□□□□ 0.71
PTPRA-208ENST00000455631 CLPSL1A2RUU4 121 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 CEACAM18A8MTB9 384 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 MCIDASD6RGH6 385 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 H3BSA7 217 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 HDAC3O15379 428 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 CHP2O43745 196 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 UMPSP11172 480 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 TNFRSF1AP19438 455 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 TNFSF4P23510 183 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 AQP1P29972 269 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 CDAP32320 146 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 MDH2P40926 338 aaKnown RBP19.48■□□□□ 0.71
PTPRA-208ENST00000455631 ZNF613Q6PF04 617 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 C1orf174Q8IYL3 243 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 GOLGA6L1Q8N7Z2 621 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 OR10S1Q8NGN2 331 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 SIGLEC11Q96RL6 698 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 MCHR1Q99705 422 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 SIAEQ9HAT2 523 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 SLCO1B3Q9NPD5 702 aa19.48■□□□□ 0.71
PTPRA-208ENST00000455631 SDR39U1Q9NRG7 319 aaPredicted RBP19.48■□□□□ 0.71
PTPRA-208ENST00000455631 M0R3H8 397 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 MGRN1O60291 552 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 ALX3O95076 343 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 NDUFA7O95182 113 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 HIST1H2ABP04908 130 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 KITP10721 976 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 ERVK-25P63136 954 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 MRPS34P82930 218 aaKnown RBP19.47■□□□□ 0.71
PTPRA-208ENST00000455631 TAF11Q15544 211 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 ASPHD2Q6ICH7 369 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 LINC00114Q6XXX2 140 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 HIST3H2AQ7L7L0 130 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 NANOGNBQ7Z5D8 188 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 MUC20Q8N307 709 aaPredicted RBP19.47■□□□□ 0.71
PTPRA-208ENST00000455631 C10orf111Q8N326 155 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 OR2Z1Q8NG97 314 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 HIST1H2ACQ93077 130 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 THOC1Q96FV9 657 aaKnown RBP19.47■□□□□ 0.71
PTPRA-208ENST00000455631 SAMD8Q96LT4 415 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 ZNF607Q96SK3 696 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 ZNF229Q9UJW7 825 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 PPP1R3CQ9UQK1 317 aa19.47■□□□□ 0.71
PTPRA-208ENST00000455631 IGHV2-70DA0A0C4DH43 119 aa19.46■□□□□ 0.71
PTPRA-208ENST00000455631 SLC2A10O95528 541 aa19.46■□□□□ 0.71
PTPRA-208ENST00000455631 RPS2P15880 293 aaKnown RBP19.46■□□□□ 0.71
PTPRA-208ENST00000455631 HOXB9P17482 250 aaPredicted RBP19.46■□□□□ 0.71
PTPRA-208ENST00000455631 ARHGDIAP52565 204 aa19.46■□□□□ 0.71
PTPRA-208ENST00000455631 KRTAP10-3P60369 221 aa19.46■□□□□ 0.71
PTPRA-208ENST00000455631 PSG4Q00888 419 aa19.46■□□□□ 0.71
PTPRA-208ENST00000455631 PAX2Q02962 417 aa19.46■□□□□ 0.71
PTPRA-208ENST00000455631 CDK5R2Q13319 367 aa19.46■□□□□ 0.71
PTPRA-208ENST00000455631 SCARB2Q14108 478 aa19.46■□□□□ 0.71
PTPRA-208ENST00000455631 TTC33Q6PID6 262 aaPredicted RBP19.46■□□□□ 0.71
PTPRA-208ENST00000455631 ZER1Q7Z7L7 766 aa19.46■□□□□ 0.71
PTPRA-208ENST00000455631 ARMC8Q8IUR7 673 aa19.46■□□□□ 0.71
PTPRA-208ENST00000455631 POU5F2Q8N7G0 328 aa19.46■□□□□ 0.71
PTPRA-208ENST00000455631 MRPL13Q9BYD1 178 aaKnown RBP19.46■□□□□ 0.71
PTPRA-208ENST00000455631 CHIAQ9BZP6 476 aa19.46■□□□□ 0.71
PTPRA-208ENST00000455631 A0A1W2PRG6 482 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 CPSF4LA6NMK7 179 aaKnown RBP19.45■□□□□ 0.7
PTPRA-208ENST00000455631 BLOC1S5-TXNDC5H3BN57 136 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 SERPINB7O75635 380 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 TRMUO75648 421 aaKnown RBP19.45■□□□□ 0.7
PTPRA-208ENST00000455631 TSPAN15O95858 294 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 ASAH2BP0C7U1 165 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 GNB2P62879 340 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 SGCAQ16586 387 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 FBLN7Q53RD9 439 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 C10orf128Q5T292 105 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 FAM205BPQ63HN1 556 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 ITLN1Q8WWA0 313 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 RAB40AQ8WXH6 277 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 ASB10Q8WXI3 467 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 NABP1Q96AH0 204 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 SEPHS2Q99611 448 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 PAIP2Q9BPZ3 127 aaKnown RBP19.45■□□□□ 0.7
PTPRA-208ENST00000455631 SLC30A2Q9BRI3 323 aa19.45■□□□□ 0.7
PTPRA-208ENST00000455631 SLC25A37Q9NYZ2 338 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms