RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 SATL1Q86VE3 508 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 LIX1LQ8IVB5 337 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 GID4Q8IVV7 300 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 SLC26A10Q8NG04 563 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 FGFBP3Q8TAT2 258 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 IPCEF1Q8WWN9 437 aaPredicted RBP9.67□□□□□ -0.86
SCN9A-205ENST00000454569 C11orf40Q8WZ69 217 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 NABP1Q96AH0 204 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 DMRTA2Q96SC8 542 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 AMELYQ99218 206 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 COPS4Q9BT78 406 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 RBM24Q9BX46 236 aaKnown RBP9.67□□□□□ -0.86
SCN9A-205ENST00000454569 ULBP2Q9BZM5 246 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 CCDC90BQ9GZT6 254 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 RACGAP1Q9H0H5 632 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 OPN3Q9H1Y3 402 aaPredicted RBP9.67□□□□□ -0.86
SCN9A-205ENST00000454569 MARCH7Q9H992 704 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 HAO2Q9NYQ3 351 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 EMC3Q9P0I2 261 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 Q9UFV3 132 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 WARS2Q9UGM6 360 aaKnown RBP9.67□□□□□ -0.86
SCN9A-205ENST00000454569 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.67□□□□□ -0.86
SCN9A-205ENST00000454569 OSGIN2Q9Y236 505 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 COMMD3-BMI1R4GMX3 469 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 TRGV8A0A0C4DH27 118 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 A0A1W2PPL8 197 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 SLC22A31A6NKX4 558 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 AHCYL1O43865 530 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 C1QL1O75973 258 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 LIMS3P0CW19 117 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 LIMS4P0CW20 117 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 TMIGD3P0DMS9 266 aaPredicted RBP9.66□□□□□ -0.86
SCN9A-205ENST00000454569 LAP3P28838 519 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 CRABP1P29762 137 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 TIMP3P35625 211 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 OR3A2P47893 321 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 UQCRFS1P47985 274 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 ROR2Q01974 943 aaKnown RBP9.66□□□□□ -0.86
SCN9A-205ENST00000454569 ZNF85Q03923 595 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 FAPQ12884 760 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 GGTLC2Q14390 218 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 IRF3Q14653 427 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 TSC22D1Q15714 1073 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 NEDD8Q15843 81 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 SLC35D3Q5M8T2 416 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 TFAP2EQ6VUC0 442 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 KCTD8Q6ZWB6 473 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 LHFPL3Q86UP9 236 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 ERI1Q8IV48 349 aaKnown RBP9.66□□□□□ -0.86
SCN9A-205ENST00000454569 LINC00346Q8IVM7 164 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 ZNF610Q8N9Z0 462 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 RFKQ969G6 155 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 APH1AQ96BI3 265 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 TM9SF2Q99805 663 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 LINC00470Q9BZP3 86 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 FAM192AQ9GZU8 254 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 SEC61A2Q9H9S3 476 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 GP6Q9HCN6 339 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 FGF20Q9NP95 211 aaPredicted RBP9.66□□□□□ -0.86
SCN9A-205ENST00000454569 MOKQ9UQ07 419 aa9.66□□□□□ -0.86
SCN9A-205ENST00000454569 HEATR1Q9H583 2144 aaKnown RBP9.65□□□□□ -0.86
SCN9A-205ENST00000454569 CENPBD1B2RD01 187 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 RGS10O43665 173 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 AKAP8O43823 692 aaKnown RBP9.65□□□□□ -0.86
SCN9A-205ENST00000454569 MRPS14O60783 128 aaKnown RBP9.65□□□□□ -0.86
SCN9A-205ENST00000454569 HLA-DQA2P01906 255 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 ITGA5P08648 1049 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 PATE4P0C8F1 98 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 PIPP12273 146 aaPredicted RBP9.65□□□□□ -0.86
SCN9A-205ENST00000454569 PCMT1P22061 227 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 PTGER4P35408 488 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 ALDH3B2P48448 385 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 HSF2Q03933 536 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 RAB40BQ12829 278 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 SGCAQ16586 387 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 EIF2S3LQ2VIR3 472 aaKnown RBP9.65□□□□□ -0.86
SCN9A-205ENST00000454569 CORO6Q6QEF8 472 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 FOXL2NBQ6ZUU3 175 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 DPY19L4Q7Z388 723 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 ZNF100Q8IYN0 542 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 SPARTQ8N0X7 666 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 GPR137CQ8N3F9 429 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 MYDGFQ969H8 173 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 TMEM80Q96HE8 168 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 NELFAQ9H3P2 528 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 POLE4Q9NR33 117 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 PLSCR4Q9NRQ2 329 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 GLRX2Q9NS18 164 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 PARPBPQ9NWS1 579 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 CNOT2Q9NZN8 540 aaKnown RBP9.65□□□□□ -0.86
SCN9A-205ENST00000454569 KCNG2Q9UJ96 466 aa9.65□□□□□ -0.86
SCN9A-205ENST00000454569 A0A1W2PQL4 384 aaPredicted RBP9.64□□□□□ -0.87
SCN9A-205ENST00000454569 ZNF503-AS2A6NEH8 195 aa9.64□□□□□ -0.87
SCN9A-205ENST00000454569 EFCAB10A6NFE3 127 aa9.64□□□□□ -0.87
SCN9A-205ENST00000454569 SNTNA6NMZ2 147 aa9.64□□□□□ -0.87
SCN9A-205ENST00000454569 C12orf71A8MTZ7 269 aa9.64□□□□□ -0.87
SCN9A-205ENST00000454569 PSMD9O00233 223 aa9.64□□□□□ -0.87
SCN9A-205ENST00000454569 ZNF593O00488 134 aaPredicted RBP9.64□□□□□ -0.87
SCN9A-205ENST00000454569 IL18BPO95998 194 aa9.64□□□□□ -0.87
SCN9A-205ENST00000454569 PTHP01270 115 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms