RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 MN1Q10571 1320 aaPredicted RBP10.79□□□□□ -0.68
SMPD4-213ENST00000454468 TCRBV16S1A1N1A0A5B0 115 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 AIPO00170 330 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 HLA-BQ31612 363 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.79□□□□□ -0.68
SMPD4-213ENST00000454468 ZNF283Q8N7M2 679 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 MAFAQ8NHW3 353 aaPredicted RBP10.79□□□□□ -0.68
SMPD4-213ENST00000454468 FGGYQ96C11 551 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 DHRS9Q9BPW9 319 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 HAO2Q9NYQ3 351 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 TAS2R5Q9NYW4 299 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 J3QRE1 110 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 OGG1O15527 345 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 ZNF354AO60765 605 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-213ENST00000454468 VAMP1P23763 118 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 UQCRC1P31930 480 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 THBS2P35442 1172 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 EFNB2P52799 333 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 CLDN6P56747 220 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 GPR85P60893 370 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 DCAF7P61962 342 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 POU4F3Q15319 338 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 LINC01590Q5TEZ4 76 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 PLCZ1Q86YW0 608 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 ADIPOR1Q96A54 375 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 TMEM41AQ96HV5 264 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 CCDC74BQ96LY2 380 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 ZNF426Q9BUY5 554 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 C20orf85Q9H1P6 137 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 KCNN3Q9UGI6 736 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 SRPK3Q9UPE1 567 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 NUBP2Q9Y5Y2 271 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 THADAQ6YHU6 1953 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 BLACEA4D250 179 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 HPXP02790 462 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 HCKP08631 526 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 ZNF43P17038 809 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 ALOX5APP20292 161 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 PSMB1P20618 241 aaKnown RBP10.78□□□□□ -0.68
SMPD4-213ENST00000454468 EFNA3P52797 238 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 TAS2R20P59543 309 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 C17orf67Q0P5P2 114 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 COL13A1Q5TAT6 717 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-213ENST00000454468 LIN54Q6MZP7 749 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 OR51A2Q8NGJ7 313 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 RBM24Q9BX46 236 aaKnown RBP10.78□□□□□ -0.68
SMPD4-213ENST00000454468 SLC19A3Q9BZV2 496 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 HRASLSQ9HDD0 168 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 A0A0G2JK05 382 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 ALG1L2C9J202 215 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 SULT2B1O00204 365 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 ZNF20P17024 532 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 SLC6A1P30531 599 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 MFGE8Q08431 387 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-213ENST00000454468 FHL1Q13642 323 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 NR0B2Q15466 257 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 Q5BKY6 102 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 SLC22A10Q63ZE4 541 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 B3GNTL1Q67FW5 361 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-213ENST00000454468 GLT8D1Q68CQ7 371 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 LYPD8Q6UX82 237 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 OVCH1Q7RTY7 1134 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 CADM4Q8NFZ8 388 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 RGP1Q92546 391 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-213ENST00000454468 ZNF501Q96CX3 271 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-213ENST00000454468 MARVELD1Q9BSK0 173 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 NPAP1Q9NZP6 1156 aa10.78□□□□□ -0.68
SMPD4-213ENST00000454468 POM121CA8CG34 1229 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 LAMTOR5O43504 91 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 SYT7O43581 403 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 WDPCPO95876 746 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 PNPP00491 289 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 ZNF28P17035 718 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 PRSS3P35030 304 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 FAUP35544 74 aaKnown RBP10.77□□□□□ -0.68
SMPD4-213ENST00000454468 GZMKP49863 264 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 PNLIPRP2P54317 469 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 ST3GAL2Q16842 350 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 DNM1P34Q6PK57 102 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 ABHD12BQ7Z5M8 362 aaPredicted RBP10.77□□□□□ -0.68
SMPD4-213ENST00000454468 UEVLDQ8IX04 471 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 OTOSQ8NHW6 89 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 FAM3DQ96BQ1 224 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 GNRHR2Q96P88 292 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 DCBLD2Q96PD2 775 aa10.77□□□□□ -0.68
SMPD4-213ENST00000454468 A0A1B0GVI7 797 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 LMX1BO60663 402 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 ZFAND5O76080 213 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 AMY2AP04746 511 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 ASAH2BP0C7U1 165 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 CCL4P13236 92 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 LCN1P31025 176 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 CCR9P51686 369 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 RPS11P62280 158 aaKnown RBP eCLIP10.77□□□□□ -0.69
SMPD4-213ENST00000454468 INSM1Q01101 510 aaPredicted RBP10.77□□□□□ -0.69
SMPD4-213ENST00000454468 RASGEF1BQ0VAM2 473 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 C19orf57Q0VDD7 668 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 RSPO4Q2I0M5 234 aaPredicted RBP10.77□□□□□ -0.69
SMPD4-213ENST00000454468 C2orf76Q3KRA6 126 aa10.77□□□□□ -0.69
SMPD4-213ENST00000454468 OR5L2Q8NGL0 311 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms