RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 DCTP40126 519 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 YAP1P46937 504 aaKnown RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 GAS1P54826 345 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 STXBP1P61764 594 aaKnown RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 BLOC1S1P78537 153 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 RPL19P84098 196 aaKnown RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 LTBQ06643 244 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 DYNC1I2Q13409 638 aaKnown RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 IL18R1Q13478 541 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 KRR1Q13601 381 aaKnown RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 CCDC6Q16204 474 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 CPTPQ5TA50 214 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 ATP1A1-AS1Q5TC04 95 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 IFNEQ86WN2 208 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 APLFQ8IW19 511 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 DND1Q8IYX4 353 aaKnown RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 PRELID2Q8N945 189 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 SEMA6DQ8NFY4 1073 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 OR11L1Q8NGX0 322 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 OLIG1Q8TAK6 271 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 ZPLD1Q8TCW7 415 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 OR5P2Q8WZ92 322 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 TLCD1Q96CP7 247 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 ADTRPQ96IZ2 230 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 KCTD7Q96MP8 289 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 IL17FQ96PD4 163 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 ATF6BQ99941 703 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 HOPXQ9BPY8 73 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 HES7Q9BYE0 225 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 TRIM15Q9C019 465 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 PCBD2Q9H0N5 130 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 TMEM38AQ9H6F2 299 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 ZNF334Q9HCZ1 680 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 NYAP2Q9P242 653 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 MUTYHQ9UIF7 546 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 RAB26Q9ULW5 256 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 C9orf84Q5VXU9 1444 aa3.77□□□□□ -1.81
HMGB3P21-201ENST00000452483 CNTNAP1P78357 1384 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 ZNF521Q96K83 1311 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 COL4A3Q01955 1670 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 A0A0B4J2E0 115 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 A0A1B0GTH9 108 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 A0A1B0GX12 115 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 EFCAB10A6NFE3 127 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 FAM166BA8MTA8 275 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 EFCAB9A8MZ26 197 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 C21orf140B9A014 251 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 NEDD8-MDP1E9PL57 170 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 CCL21O00585 134 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 KMOO15229 486 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 BIRC5O15392 142 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 PHF1O43189 567 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 XPNPEP2O43895 674 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 PRKNO60260 465 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 CDC40O60508 579 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 CTNSO60931 367 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 GCGP01275 180 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 RLN2P04090 185 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 HOXD4P09016 255 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 HKR1P10072 659 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 LIPCP11150 499 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 SLC2A1P11166 492 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 CD36P16671 472 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 TBPP20226 339 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 PSMA1P25786 263 aaKnown RBP3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 CLDN12P56749 244 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 RANP62826 216 aaKnown RBP3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 RPL8P62917 257 aaKnown RBP3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 TNFRSF9Q07011 255 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 RIGQ13278 110 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 GTF2H2Q13888 395 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 GPR18Q14330 331 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 ZNF268Q14587 947 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 PTGES3Q15185 160 aaKnown RBP3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 TIGITQ495A1 244 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 FAM106AQ4KMX7 169 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 UNC50Q53HI1 259 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 SPIN4Q56A73 249 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 CARD16Q5EG05 197 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 DCST2Q5T1A1 773 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 OR52E8Q6IFG1 317 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 FRMPD2BQ6IN97 320 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 GTF2H2CQ6P1K8 395 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 MED27Q6P2C8 311 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 CD200R1LQ6Q8B3 271 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 FRRS1Q6ZNA5 592 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 Q6ZSV7 163 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 DPPA2Q7Z7J5 298 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 PDIK1LQ8N165 341 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 BPIFB2Q8N4F0 458 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 NANOGP1Q8N7R0 232 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 C12orf29Q8N999 325 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 ACOT4Q8N9L9 421 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 MDS2Q8NDY4 140 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 OR2T33Q8NG76 320 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 MCOLN3Q8TDD5 553 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 DOK4Q8TEW6 326 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 PYROXD1Q8WU10 500 aa3.76□□□□□ -1.81
HMGB3P21-201ENST00000452483 IL1F10Q8WWZ1 152 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms